Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01207 ATGGCGGAGGGAGGGGAAGATAAAATTTGCTGCATTTCTCACGAGTTTTTCAGGGCGGCTTCTGAAAACCCTAACAAAATCGCAGTTGTACACGCGTCCGGTGGAGCTAGGATTTGTAGAGAACTAAGGAAGAGGATCATCGACGATCCTGGCTTCGGCAACGACCACGACGACTTCTTCAATGTCCGTCGAGAATCTCCGTCTCATCTGGCTTACAAAGGAGATGAAATCTTCACTTTCTCCGATATTTTGAGTTCCGTTGATTCCCTGAGCTCTCGTATCCGTCGCGTCCTCGATGGCGGTGACGATCCGGACTTGATCAGACCGAGAGGTTTTTTTCGTAGAGAGCAAACCGTAAATAATAAAATTTCTGAGTTTTCAAATGTTGTCGGCCTAACTGGAGAGCAGTCGACTGATTTTCAAAATATGATTACTACCCCACAAATATTGGGAATATATATGGTACCTTCTGTAGAATACATAGTTGCTGTTCTTTCGGTTCTAAGATGTGGGGAGGCTTTTTTGCCTCTAGATCCTTCATGGCCAAAAGAAAGGATATTATCCATTGTTTCTTCTTCAAAGGTTGCTCTGATTATAAAGTGCAAGTCTTCTTTTGATACGAGTGAGAGTCAGAATCTCAATGAATCAGATAGGCTGGCAGATCACTGCAGTTGTTCTGTTTTATACATGTCTATGAAAGGGAACCTTGAAGAGCATTTTGATCGGTCCAAATTAATTTGGCCTTGTGAAAGCAGAAATGCAAGAATGTTTTGTTATTTGATGTACACATCTGGATCAACTGGGAAGCCTAAGGGTGTGTGTGGCACTGAGAAAGGTCTCCTGAATCGCTTCTTATGGATGCAAAAATTGTTTCCCCTAAATGGAGAGGAAATTTTATTGTTTAAGACATCGATCAGCTTTATTGACCATCTACAAGAGTTTCTTAGTGCTATCCTTACTTGCACCCCACTGATTATACCTCCATTTGAGGAGTTAAAGGCAAATCCATATTATATTGTCGATTTTCTAGAGGCTTACTGTATTTCAAGGTTGATTGTTGTTCCTTCAGTGATGAGAACAATTCTTCCTGCAATGAGAAGCCACTACAATATGCGTGTTCGGAGCTCCTTACAAGTTTTAGTGCTTAGTGGAGAACTTCTACCTATATCTTTGTGGGATATGCTTTGCAAGCTATTGCCTGAGACTTCTATCTTGAATCTGTATGGAAGTACAGAGGTATCCGGCGACTGTACATATTTTGATTGCAATAGGTTGCCAATGATTTTGGAGACTGAGGTACTAAGCAGTGTGCCTATTGGGTTACCTATTTCTAACTGTGACATAGTACTTGTTGGAGAACCAACTGAGCCCAATGAAGGTGAAATATATGTTGCTGGCCTTTGTACATCGATGGGATACTTTTCTGATCCTACTATTACATCTTTGGACTATGTAAAGTTGCCTCAAGACTCTAGACTTTGTAATGGTCTTCCAAACCTAGATACTGGAACTCAATTATATTTTCGAACTGGCGATTTTGCCAGAAGGATTCAGTCTGGTGATTTGGTCTTCTTGGGGAGAAAAGACCGCACAATAAAAGTTAACGGGCAGCGTGTTGCTTTGGAGGAGGTTGAAAATATTTTAAGGGAATATCCGGATGTGGTTGATTCTGCTGTTATTTGTCATAAAGATCAAGGAGAACCTGCATACCTTGGGGCTTACATAGTATTGAAAAGAAAGGACGACTTCTGCGAAATGTTGATCTCCTCTATTAGATGTTGGTTACTCAAAAAGCTACCTCCAGCAATGATACCTAACAATTATTTATGTATTGAATCATTGCCTATGTCTTCCACTGGGAAAGTAGATTACGCTTTCCTGTCAGGATCAGCATTTTCCACGAAGCAGGTCCGAAATGATACTGGTGTTACTCAACACGATCATGGTCTTTTGCAGGTTATTAAAGAGGCCTTTTGTGATGCCTTGAGGGTCGAAGAAGTTGTGGATGATGATGATTTCTTTGTGATGGGTGGTAATTCACTTGCCGCAGCACAAGTTGCCCATAAGTTAGGAATTAATATGAGATTGTTGTATATCTTCCCTAGCCCATCCAAGCTTCTACATGCTCTTCTAGACAGTGAAGGTTCATATAAAGATGAGTTCCCCATTTCTGCTGATTGGGAAAAAAAGCTGAAACCATACAAGGGAAACATGTTTTATTCTCTTAATTCATCGACTCCTGGAGACAAGAATAAGTTACTTGGGAGGTCATTGAGAATCCTTTCTAAAAGGGAAGATGGTTCTCCTGCTAGTTCTAAATATTTGAAGGTGGAGTCCAACTTATACACACATTTGAATAGTACAATCTCAAGAGATAGGAACCTTTGGGTTTCAGGTTTTTATTTATCGACATCATGTTCATTTAGCCGCTGTAACAAGGTAGTGTATGAAGGGGAGCATGAGGTCAATGATATACACCAAGCATGCTGGTCAGTTAAAACTCCAAGAAATAGAGAAGGGTCTATTCGTGAATTGTGGAAGGTTCATTTGAGATCATGTGTGGACGCATCACCCTTGGTTGTGTTAAAGGATGGTGACATCTATTTGTTTATTGGATCTCATTCGCACATATTTCTCTGTGTTGATGCCATAAGTGGTTTTCCTCGATGGGAGGTCAAATTGGAAGGACGAGTAGAATGTTCAGCAGCAATTGTTGATGATTTTTCTCAGGTTGTAGTTGGATGTTACAAAGGAAAAGTCTACTTTCTTGATTTTATCACTGGCAACATCTCTTGGACCTTTCAAACAGGAGGTGAGGTTAAGTCACAGCCAGTCTTGGACAAATACAGAAACTTGATCTGGTTTGGATCATACGATCATAATCTATATGCTCTAGATTATAGAAACCACTGTTGCGTTTACAAGATCTCATGTGGCGGAAGCATAAATGGATCACCTTCTATCGATATGGTTCGTAACATGCTTTATGTGGCATCTACTAGGGGGCGTGTGACAGCTATATCAGTAGAGACTTCACCATTCAGCACTATGTGGCTGCATGAGTTGGGAGTGCCAGTGTTTGGATCTCTTTCCATCAGTTCTCCTAATGGCAATGTCATTTGTTGCATGGTGGACGGGCATGTAATTGTATTGAACTCAAGTGGGTCCATTGTCTGGAAGGCAATTACGGGTGGTCCAATATTTGCTGGAGCTAGCATATCTTATGCCCTTCCTTCTCAGGTGCTCATATGTTCCAGAAATGGCGGCATCTACTCGTTTGAATTGGAAGAAGGAGATTTGATGTGGGAATACAATATTGGAGACCCAATTACTTCATCTGCTTATGTCGATGAAAACATGCAGTTGATATCTGATCCCGACCATTCATCAGACAGATTGGCCTGCATTTGCAGCAGTTCTGGAAGCGTTTATTTACTTCGAATCAATTTGAATGCCATAATAGAGAGAAATCAACCAGATAAAGGTTCAGCAGGCCCAATAGTGCAGGAATTTGCAAAGATGGATCTCCAAGGAGACATTTTCTCTTCACCAGTGATGATCGGTGGACGGATATTTGTTGGCTGCAGAGACGATTATGTCCATTGCATGGGGGTTGAGGTTAAGATTTCAGTGAGAGATTAA 3642 0.4108 MAEGGEDKICCISHEFFRAASENPNKIAVVHASGGARICRELRKRIIDDPGFGNDHDDFFNVRRESPSHLAYKGDEIFTFSDILSSVDSLSSRIRRVLDGGDDPDLIRPRGFFRREQTVNNKISEFSNVVGLTGEQSTDFQNMITTPQILGIYMVPSVEYIVAVLSVLRCGEAFLPLDPSWPKERILSIVSSSKVALIIKCKSSFDTSESQNLNESDRLADHCSCSVLYMSMKGNLEEHFDRSKLIWPCESRNARMFCYLMYTSGSTGKPKGVCGTEKGLLNRFLWMQKLFPLNGEEILLFKTSISFIDHLQEFLSAILTCTPLIIPPFEELKANPYYIVDFLEAYCISRLIVVPSVMRTILPAMRSHYNMRVRSSLQVLVLSGELLPISLWDMLCKLLPETSILNLYGSTEVSGDCTYFDCNRLPMILETEVLSSVPIGLPISNCDIVLVGEPTEPNEGEIYVAGLCTSMGYFSDPTITSLDYVKLPQDSRLCNGLPNLDTGTQLYFRTGDFARRIQSGDLVFLGRKDRTIKVNGQRVALEEVENILREYPDVVDSAVICHKDQGEPAYLGAYIVLKRKDDFCEMLISSIRCWLLKKLPPAMIPNNYLCIESLPMSSTGKVDYAFLSGSAFSTKQVRNDTGVTQHDHGLLQVIKEAFCDALRVEEVVDDDDFFVMGGNSLAAAQVAHKLGINMRLLYIFPSPSKLLHALLDSEGSYKDEFPISADWEKKLKPYKGNMFYSLNSSTPGDKNKLLGRSLRILSKREDGSPASSKYLKVESNLYTHLNSTISRDRNLWVSGFYLSTSCSFSRCNKVVYEGEHEVNDIHQACWSVKTPRNREGSIRELWKVHLRSCVDASPLVVLKDGDIYLFIGSHSHIFLCVDAISGFPRWEVKLEGRVECSAAIVDDFSQVVVGCYKGKVYFLDFITGNISWTFQTGGEVKSQPVLDKYRNLIWFGSYDHNLYALDYRNHCCVYKISCGGSINGSPSIDMVRNMLYVASTRGRVTAISVETSPFSTMWLHELGVPVFGSLSISSPNGNVICCMVDGHVIVLNSSGSIVWKAITGGPIFAGASISYALPSQVLICSRNGGIYSFELEEGDLMWEYNIGDPITSSAYVDENMQLISDPDHSSDRLACICSSSGSVYLLRINLNAIIERNQPDKGSAGPIVQEFAKMDLQGDIFSSPVMIGGRIFVGCRDDYVHCMGVEVKISVRD* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01207 1213 Pfam AMP-binding enzyme C-terminal domain 543 621 IPR025110 -
Eupl08g01207 1213 Gene3D - 656 713 IPR036736 -
Eupl08g01207 1213 Pfam PQQ enzyme repeat 911 945 IPR002372 -
Eupl08g01207 1213 Pfam Phosphopantetheine attachment site 653 690 IPR009081 -
Eupl08g01207 1213 ProSitePatterns Putative AMP-binding domain signature. 260 271 IPR020845 -
Eupl08g01207 1213 SUPERFAMILY Acetyl-CoA synthetase-like 148 629 - -
Eupl08g01207 1213 PANTHER BETA-ALANINE-ACTIVATING ENZYME 8 1206 - -
Eupl08g01207 1213 Gene3D - 118 529 IPR042099 -
Eupl08g01207 1213 CDD A_NRPS 148 625 - -
Eupl08g01207 1213 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 841 1203 IPR011047 -
Eupl08g01207 1213 Pfam AMP-binding enzyme 150 534 IPR000873 -
Eupl08g01207 1213 Gene3D - 531 655 IPR045851 -
Eupl08g01207 1213 SUPERFAMILY ACP-like 649 710 IPR036736 -
Eupl08g01207 1213 Gene3D - 907 975 - -
Eupl08g01207 1213 FunFam Putative acyl-activating enzyme 19 1012 1206 - -
Eupl08g01207 1213 Pfam PQQ-like domain 991 1167 IPR002372 -
Eupl08g01207 1213 Gene3D - 976 1206 IPR015943 GO:0005515
Eupl08g01207 1213 SMART ire1_9 1074 1105 IPR018391 -
Eupl08g01207 1213 SMART ire1_9 1031 1062 IPR018391 -
Eupl08g01207 1213 SMART ire1_9 902 935 IPR018391 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01207 Eupl-Chr8 32339138 32402480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01207 260 622 Monolignol Biosynthesis Gene Families AT4G19010 23.861 1.29e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01207 K00142 - nnu:104605230 1568.52