Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01205 ATGATTTCTGTTGCTTCTCCTGAAACCCAATCCCCACAAATCTCTCCCCAAGTCCCCCATTCTGAAATTGAGAATCCCTCTTCTGAGGACTTCGTCTTTCGATCAAAACTCCCAGAAATCCCAATCTCCAATCACCTCCCTCTTCACACATACTGTTTTGAGAAAGTTTCAGAATTCTCAGACAGACCTTGTATCATCACAGGCTCTAATGGCAGAATCTACTCCTTCGGCGAAACTCATCTCATTTGCCAGAAAACAGCCGCTGGATTAACAAACATGGGTGTCAAAAAAGGTGATGTCATCATGATTCTCCTTCAAAACTGTCCTGAATTCGTCTTCTCTTTCATGGGAGCTTCAATGATTGGTGCTATAACCACCACAGCCAACCCGTTCTACACTTCAACGGAGATCTTCAAACAATTCTCTGCTTCAGGTGCTAAAATCATAATCACCCAATCCCAATATGTCGACAAGCTTCGAGATTCCACTGAGAATTTCCCGAAAATTGGAGAGGATTTCGAAGTAATCACCATTGACGATCCACCAGAGAATTGTCTCCATTTCTCTGTAATTTCTGGTGCAGACGAAAGGGAAATTCCATCTGTTTCAATCGATTCCAACGATCCAGTTGCTCTTCCATTCTCTTCAGGAACGACTGGATTACCGAAAGGCGTGATCTTGACACATAAGAGCTTGATCTCTAGTGTTGCTCAACAAGTTGATGGAGAGAATCCCAATTTGTATTTGAATTCAGATGACATTGTCCTCTGTGTTCTTCCATTGTTTCATATTTACTCCTTGAACTCTGTTCTTCTCTGTTCTCTACGAGCTGGGTCTGGAGTGCTCTTAATGCAGAAGTTTGAAATTGGGGTACTGTTGGAGCTGATCCAGAAGTACCGGGTTTCGGTTGCCCCGGTTGTTCCACCGTTGGTTCTGGCATTGGCGAAGAATCCAATGGTTGAGAGTTTCGATCTCAGCTCGATTCGGATCGTCTTATCCGGTGCAGCTCCACTAGGGAAGGAGCTGGAGGAGGCTCTCAAGAGCCGAGTCCCTCAGGCGATTTTCGGACAGGGTTATGGGATGACAGAGGCCGGACCGGTGCTATCAATGTGCCTGGGATTTGCAAAGCAGCCATTCCAAACCAAGTCCGGTTCATGTGGCACTGTTGTAAGGAATGCAGAGCTCAAAGTCATCGACCCGGAAACTGGTCTTTCTCTCCGCCACAACCAACCCGGCGAGATATGCATCCGCGGGCCTCAGATCATGAAAGGGTATTTAAATGATGCGGATGCCACGGCAACCACGATCGACGTGGAGGGTTGGCTTCACACGGGTGATATAGGCTATATAGATGATGATGAAGAGGTCTTCATTGTTGATAGAGTGAAGGAGCTCATCAAATTTAAAGGGTTCCAGGTACCACCAGCTGAGCTTGAGGCTCTCCTTGTGAGCCACCCATCCATTGCAGATGCTGCCGTCGTGCCCCAAAAAGATGCCGCAGCCGGCGAAGTTCCTGTTGCATTCGTTGTTCGAGCCAAAGATTTCGAGCTTACTGAGGAAGCCATAAAAGATTTTATAGCTAAACAGGTGGTGTTCTACAAGAAACTGCACAAGGTGTACTTCATCCATGCCATTCCAAAGTCCCCTTCAGGAAAGATTTTGAGAAAAGATCTTAGAGCCAAATTGGCTTCAAGCTCCTAA 1701 0.4638 MISVASPETQSPQISPQVPHSEIENPSSEDFVFRSKLPEIPISNHLPLHTYCFEKVSEFSDRPCIITGSNGRIYSFGETHLICQKTAAGLTNMGVKKGDVIMILLQNCPEFVFSFMGASMIGAITTTANPFYTSTEIFKQFSASGAKIIITQSQYVDKLRDSTENFPKIGEDFEVITIDDPPENCLHFSVISGADEREIPSVSIDSNDPVALPFSSGTTGLPKGVILTHKSLISSVAQQVDGENPNLYLNSDDIVLCVLPLFHIYSLNSVLLCSLRAGSGVLLMQKFEIGVLLELIQKYRVSVAPVVPPLVLALAKNPMVESFDLSSIRIVLSGAAPLGKELEEALKSRVPQAIFGQGYGMTEAGPVLSMCLGFAKQPFQTKSGSCGTVVRNAELKVIDPETGLSLRHNQPGEICIRGPQIMKGYLNDADATATTIDVEGWLHTGDIGYIDDDEEVFIVDRVKELIKFKGFQVPPAELEALLVSHPSIADAAVVPQKDAAAGEVPVAFVVRAKDFELTEEAIKDFIAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDLRAKLASSS* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01205 566 Gene3D - 463 564 IPR045851 -
Eupl08g01205 566 FunFam Long-chain-fatty-acid--CoA ligase FadD 34 463 - -
Eupl08g01205 566 Gene3D - 24 462 IPR042099 -
Eupl08g01205 566 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 560 - -
Eupl08g01205 566 SUPERFAMILY Acetyl-CoA synthetase-like 41 564 - -
Eupl08g01205 566 ProSitePatterns Putative AMP-binding domain signature. 212 223 IPR020845 -
Eupl08g01205 566 Pfam AMP-binding enzyme 54 468 IPR000873 -
Eupl08g01205 566 CDD 4CL 42 558 - -
Eupl08g01205 566 MobiDBLite consensus disorder prediction 1 25 - -
Eupl08g01205 566 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Eupl08g01205 566 MobiDBLite consensus disorder prediction 1 24 - -
Eupl08g01205 566 FunFam 4-coumarate--CoA ligase 2 464 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01205 Eupl-Chr8 32320875 32329343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01205 32 475 Monolignol Biosynthesis Gene Families AT1G65060 70.917 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01205 K01904 - ming:122061771 958.362