Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01204 ATGGCCGGGAAAGAAGCAGCAGGAAAGGAAGAAGCGGTAAGACTTAAAGCCCTAGCAGAGGAGAAATACAAACTCTCCAAACTGAAATCCGCGCTAAAATACGCCAAAAGAGCACAGCGCCTCTGTCCAGACCTCGACGGCATCTCCGACATGGTGACCTCCTTCAAAATCATCCACGTGGCCTCCAAATCTTCATCGGACGGTACTCCTCCTGACTGGTACAGTATTCTCCAGGTAGAGCCCTTCTCTCACATAAACACCATCAAGAAACAGTACAAGAAACTTGCCCTAATTTTACACCCCGACAAGAACACTTGCTTAGCTTCCGAAGAAGCCTTCAAACATGTCGGCGAAGCGTTCCGAGTCCTCTCCGATAAAATCCGGAGAAAGGATTACGATCTCAAGCTCCGTATCGCTTTACAGGCGACGGCCATCACCACCACCACATCCGTCGAGACGTTCTGGACCGCGTGCTCGACTTGTCGGTTGTTTCACCAATTCGAGAGGCAGTATATCGGTCACAGTCTCATGTGCCCTAACTGCAAGAAGAGTTTTTTAGCTGTAGAAGTAACGGTTGATGATGAACCCGACGATGAAGCTAGGGTTAGGGCTGGGACAAGGGCTAGGACTAGGGCTAGCGCTTCTATAGAGAAGAATACGAGGACAGAATCCGTTGGAGGATCGAGAATGGTAACTAGAAAGCGGAAAATTACTATCAGTGTTTCGGTAGAGAGATTGGGATCTCAATCCAAGAAGGTGAAAACCAGACCTGAAAAGACCTTGGCAGAAATGCAATTGGAAGCGAAGCAAAAATCTCAGACCTTGGCAGAAATGCAATTGGAAGCAAAGCGAAAAGCTCATCAGGAAAAGATGAAGTTGAAGGAAAAAGTGAAGGGGAAAGATGAGGAGAAAAATAATAATAAGAAGAAGGAGAAGGAGAAGGAGGAGAAAAAAAAGAATGAGAAGGAGGTGGAGAAGGAGAGACGAGTGGTTGTGGCTTCGAGGACAAGTAACGATCAGGAAATTATGATGGTGGAGGATTCGGATTTCTACGATTTCGATAAGGATAGGATTGAGCGTAGTTTCAAGAAAGGTCAGGTATGGGCTGTTTATGATGACGATGATGGAATGCCACGGCATTATGGTTTGATTGATGAAGTTATCTCGGTTAATCCTTTTGAGGTGAAGATGAGTTGGTTAGACATGCAGAACAATGTAGATGAGACATTAATCTGTTGGGAGAAATCAGGGTTCCATATTTCTTGTGGCTGGTTTAAGGTTACTCGGAAGACTTCCATTGATTCCGTGAATTTCTTTTCGCATATCGTGGATTGCGAAAGAGTCGCTAGAGAGGTTTATAGGATTTACCCAAAAAAGGGTTCTGTTTGGGCGCTTTATAGCGAGAGGGCTTTGGACGGAGATGAGGGGAACCTGTCAATTAGGGATAATCGATGTTATGATTTAGTTGTATTTCTCACGAGTTACAGTGAGATGCATGGGTTGAGCATGGCATACCTTGAGAAGGTTGAAGGGTTCAAGACAATCTTTAAGAGACGAGAGATTGGGTGTCACGCTATTAGATGGCTTGAGAAAGATGATGTCCGGTTGTTTTCGCATCAGATTCCTGCAAGGAAGCTCTCAGGCACAGAGGCTCCAGAACTTCCGAAAGACTGTTGGGAGCTTGATCCTGCTTCACTTCCTTCAGATTTGCTTCGTATTGGTGGGTGA 1728 0.4554 MAGKEAAGKEEAVRLKALAEEKYKLSKLKSALKYAKRAQRLCPDLDGISDMVTSFKIIHVASKSSSDGTPPDWYSILQVEPFSHINTIKKQYKKLALILHPDKNTCLASEEAFKHVGEAFRVLSDKIRRKDYDLKLRIALQATAITTTTSVETFWTACSTCRLFHQFERQYIGHSLMCPNCKKSFLAVEVTVDDEPDDEARVRAGTRARTRASASIEKNTRTESVGGSRMVTRKRKITISVSVERLGSQSKKVKTRPEKTLAEMQLEAKQKSQTLAEMQLEAKRKAHQEKMKLKEKVKGKDEEKNNNKKKEKEKEEKKKNEKEVEKERRVVVASRTSNDQEIMMVEDSDFYDFDKDRIERSFKKGQVWAVYDDDDGMPRHYGLIDEVISVNPFEVKMSWLDMQNNVDETLICWEKSGFHISCGWFKVTRKTSIDSVNFFSHIVDCERVAREVYRIYPKKGSVWALYSERALDGDEGNLSIRDNRCYDLVVFLTSYSEMHGLSMAYLEKVEGFKTIFKRREIGCHAIRWLEKDDVRLFSHQIPARKLSGTEAPELPKDCWELDPASLPSDLLRIGG* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01204 575 MobiDBLite consensus disorder prediction 212 227 - -
Eupl08g01204 575 Pfam Domain of unknown function (DUF3444) 340 550 IPR024593 -
Eupl08g01204 575 Coils Coil 283 330 - -
Eupl08g01204 575 Gene3D DnaJ domain 58 160 IPR036869 -
Eupl08g01204 575 CDD DnaJ 72 125 IPR001623 -
Eupl08g01204 575 MobiDBLite consensus disorder prediction 282 326 - -
Eupl08g01204 575 PRINTS DnaJ domain signature 108 128 IPR001623 -
Eupl08g01204 575 PRINTS DnaJ domain signature 92 107 IPR001623 -
Eupl08g01204 575 PRINTS DnaJ domain signature 74 92 IPR001623 -
Eupl08g01204 575 ProSiteProfiles dnaJ domain profile. 72 136 IPR001623 -
Eupl08g01204 575 Pfam DnaJ domain 72 133 IPR001623 -
Eupl08g01204 575 Coils Coil 261 281 - -
Eupl08g01204 575 SMART dnaj_3 71 128 IPR001623 -
Eupl08g01204 575 PANTHER BNAC03G44070D PROTEIN 8 567 - -
Eupl08g01204 575 MobiDBLite consensus disorder prediction 203 229 - -
Eupl08g01204 575 SUPERFAMILY Chaperone J-domain 69 137 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01204 Eupl-Chr8 32304244 32308186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01204 3 190 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.846 1.64e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01204 - - mof:131164618 644.425