Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01186 ATGGTGGAAGGAAGGGTATGTTTGTCCCGAGAGGCTAGAAATGGCCTGGAATTTCTGAAACGTAAAAGGCTCCAACGGATGAATTCAGGCACTGTGCCTGAAGTTGTAAATGTTACTAACATGATGACCAGAAGTGCAGGGGACGGTTTAAGAGCTTCTGCATCATGTGGGATGAGATTGCATGGTAATGAAGATGCATATTCTCAATCCGGTGGTGCTTCAAGTGGGAAGGATGTCTTTTTAAAGCGCAAGGTGGATAAGTTTGACACAGCTGATCTAGAATGGACTGACAAAATTCCAGAGTGCCCTGTATTCTACCCAACAAAGGAGGAGTTTGAGGATCCTTTAATTTATCTGCAAAAGATTGCTCCCGAAGCTTCAAAATATGGTATATGCAAGATTATTTGCCCCTTGACTGCTTCAGTTCCTGCTGGTGTTGTATTGATGAAAGAGAAAGCTGGTTTTAAGTTCACAACTAGAGTGCAACCTCTACGGCTTGCTGAGTGGGACACAGATGACAAAGTCACATTTTTCATGAGCGGAAGAAATTATACATTCCGTGATTTCGAGAAAATGGCGAACAAGGTGTTTGCTCGTAGATATTGTAGTGCTGGATGTCTTCCTGCTACGTATTTGGAAAAGGAATTTTGGCATGAAATAGCTTGTGGCAAGACAGAAACTGTTGAGTATGCATGCGATATTGATGGTAGTGCCTTTTCATCTTCTCCTAATGATCAGCTTGGGAGAAGCAAATGGAACTTGAAGATTCTTTCTCGGCTGCCCAAATCTATATTGCGTCTTCTGGGAACTGCAATTCCGGGAGTAACAGATCCCATGCTTTACATTGGAATGCTATTTAGTATGTTTGCATGGCATGTGGAAGATCATTACTTGTATAGCATAAATTATCATCACTGTGGGGCTTCGAAAACTTGGTATGGGGTTCCAGGTCATGCAGCTCTTGAGTTTGAAAAGGTAGTTCGGGAGCATGTGTATACTCGTGATATTTTATCAACTGAGGGAGAGGATGGTGCATTTGATGTATTATTGGGAAAGACAACCCTGTTTCCACCAAATATTTTGGTAGACCATGATGTCCCTGTCTATAAGGCTGTACAAAAGCCTGGGGAGTTTGTAGTCACCTTTCCTCGAGCATATCATGCAGGATTCAGTCATGGTTTTAATTGTGGCGAGGCCGTAAACTTTGCAATTGGTGATTGGTTTCCAATGGGTGCTGTTGCTAGCCGACGTTATTCACTTCTAAAAAGGGTGCCCCTTCTTCCTCATGAGGAACTTCTCTGTAAAGAAGCAATGCTTCTTTCTAAGGAGAGTTCATCAGGACCTGAACTTAAAGATCTGGCAGACTTGGTTTCTCACCATTGCGTTAAGGTTTCTTTTGTGCACCTAATGCGAATCCAGCATCGTGCTCGCTGGTCATTAGTGAAATCTGGGGCATGTACACGTGTTTCTTCAAATTCCCAGGGAACCATTCTCTGCAGCCTTTGCAAACGTGACTGTTATGTGGCATACATTAAATGCAACTGTTATTTGCATCCTATCTGCCTTCTACATGAAGCTGAATCATTGGGCTGTCCATGTGGATGCAATCGCGTTCTCTCCCTTAGGGAGGGCCTTTTGGAAATGGAGGCTGTAGCACAGAAGTTTGAGCAGGAGGATGGAATATTAGAGGAGGTTCAACAGCAAATAAAATGTGGAGATGATTTGTTTCTGCAGTCGAAGTTGTTCCCACACCCTGAAGAGGATGGATATGTTCCTTATTCTGAGATAAAATTTGAACTGAACCCTGAAACTATGGAAACTATTCAGGGTCAATTGCAAGATCCAGAAAGTGTTCCTCGCGGGCTTCCTATGTTGAGCAATGAGAAAGAATTCATCAAATCTGATGTTGCAGAAGCTTCTGTTTCTTGTGCAGCATCAACTCTATGCTCTTTTCTAGGGCCAAATGAAAGCTGTTTTCTTCCCAATGATGGCTCTATAAATTTGAATTTGGTTCCTGCTAAGGATTCCGAAAAGCTTCCTGGCAGTGCATATGAATCTTCACGATCCTCTCCATCATATGATAAATGCTTGACTGTTGATCGAGGCAATTTTCATGGGTCACAGATTATGCCTAATGGGGATCAATATAGTGATGATTCTGATTCAGAAATATTCAGGGTTAAACGTAGATCGTCTGTGAAAGCAGAGAAAAGAACTCTGGATAACGTGATGAAGTCAAAGTTTTCTGAACAGCAGGGGCTGAAACGGTTGAAGAAACTCCATCCTGAAGGAAGACGCGGGCAATTGTCACCATCAGACTGCTACATAACCAACAAGCAGGACCGACATTTTGGCCCCGGTGTTCATTCTAAAGAAGCACCATTTTCCGCTCCAAAAGACAGGATTGCAGGAGGAACCACAATTCCAATAGCTAACAAGATCAGGCCGGGTGTGACTGACTCGAAGATGTGTGACAAGGAGGATGCCCTGAGAGCAAAACCAAGAGAATACGGCAGAAAGGATAACTTCCAGGTCGATGTAGGAAAGACAATGTGGGGGGAACCACCACCTATTGAGATGGGGCCGAAGCGCCTAAAAGTCAGAGGCCCATCATTTCCTATTGCCAGTGAGCAGGCTGTATCAAGCAGTAGTAGATGGCAGGAAACTGACGAGAAATCTAGGGAGACCTACCTCAAGAGTTTCTTCTAG 2709 0.4356 MVEGRVCLSREARNGLEFLKRKRLQRMNSGTVPEVVNVTNMMTRSAGDGLRASASCGMRLHGNEDAYSQSGGASSGKDVFLKRKVDKFDTADLEWTDKIPECPVFYPTKEEFEDPLIYLQKIAPEASKYGICKIICPLTASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTDDKVTFFMSGRNYTFRDFEKMANKVFARRYCSAGCLPATYLEKEFWHEIACGKTETVEYACDIDGSAFSSSPNDQLGRSKWNLKILSRLPKSILRLLGTAIPGVTDPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGVPGHAALEFEKVVREHVYTRDILSTEGEDGAFDVLLGKTTLFPPNILVDHDVPVYKAVQKPGEFVVTFPRAYHAGFSHGFNCGEAVNFAIGDWFPMGAVASRRYSLLKRVPLLPHEELLCKEAMLLSKESSSGPELKDLADLVSHHCVKVSFVHLMRIQHRARWSLVKSGACTRVSSNSQGTILCSLCKRDCYVAYIKCNCYLHPICLLHEAESLGCPCGCNRVLSLREGLLEMEAVAQKFEQEDGILEEVQQQIKCGDDLFLQSKLFPHPEEDGYVPYSEIKFELNPETMETIQGQLQDPESVPRGLPMLSNEKEFIKSDVAEASVSCAASTLCSFLGPNESCFLPNDGSINLNLVPAKDSEKLPGSAYESSRSSPSYDKCLTVDRGNFHGSQIMPNGDQYSDDSDSEIFRVKRRSSVKAEKRTLDNVMKSKFSEQQGLKRLKKLHPEGRRGQLSPSDCYITNKQDRHFGPGVHSKEAPFSAPKDRIAGGTTIPIANKIRPGVTDSKMCDKEDALRAKPREYGRKDNFQVDVGKTMWGEPPPIEMGPKRLKVRGPSFPIASEQAVSSSSRWQETDEKSRETYLKSFF* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01186 902 Gene3D Cupin 102 460 - -
Eupl08g01186 902 FunFam Lysine-specific demethylase isoform A 97 446 - -
Eupl08g01186 902 MobiDBLite consensus disorder prediction 782 804 - -
Eupl08g01186 902 SUPERFAMILY Clavaminate synthase-like 180 435 - -
Eupl08g01186 902 SMART cupin_9 249 419 IPR003347 -
Eupl08g01186 902 ProSiteProfiles JmjN domain profile. 102 143 IPR003349 -
Eupl08g01186 902 MobiDBLite consensus disorder prediction 887 902 - -
Eupl08g01186 902 ProSiteProfiles JmjC domain profile. 249 419 IPR003347 -
Eupl08g01186 902 Pfam C5HC2 zinc finger 499 550 IPR004198 -
Eupl08g01186 902 PANTHER LYSINE-SPECIFIC DEMETHYLASE 94 726 - -
Eupl08g01186 902 Pfam jmjN domain 103 135 IPR003349 -
Eupl08g01186 902 MobiDBLite consensus disorder prediction 848 902 - -
Eupl08g01186 902 SMART JmjN_1 101 142 IPR003349 -
Eupl08g01186 902 Pfam JmjC domain, hydroxylase 279 402 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01186 Eupl-Chr8 31914280 31930862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01186 99 558 JUMONJI Transcription Factor Family AT1G30810 33.396 1.81e-64 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl08g01186 JmjC 2.6e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01186 - - ming:122079978 1238.4