Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01185 ATGTCGTTCGACGAACAACACCTTCGGATCGAAAATGCGCGACTCAAAGACGAGCTCGAGCGTCTCTCTTGTGTCGCTTCACGATATAGTGGCCGGCCGATACAAGCACTAGGGCCGCCGCCTCCTCTCCTACTCCCTTCATTGGATCTTGACATGGGTATTTACTCTAGGCATTTCCAAGAACCAATGGGTACTTGCACCGATATGATGCCGGTGTCTGCAATGCCGGAGAATCCGCACCTCGCTGGTGGAAATCTAATTATGGAACAGGAGAAGCATTTGGCACTCGAGCTTGCCATGACTGCTATGGATGAACTTGTGAAAATGTGTCAGGTGACTGAGCCTCTTTGGATTCGAAGTAGCAATGGCACCATGGAAATGCTCAACTTAGAAGAGCACACAAGGATGTTTCCATGGCCGATGAACCTCAATAAGCACCAGAGCGAGCTCAGGACGGAAGGCACCCGGGACAGTGCTGTTGTTATAATCAACAGCATCACTCTTGTGGACGCATTCTTAGATGCTAACAAATGGATGGAGCTGTTTCCTTCAATCGTCTCTAGGGCAAAAACTGTTCAAATTATAACTTCTGGTGTTTCTGGTCATGCTAATGGCTCACTTCATCTGATGTACGCAGAGTTTCAGGTTCTTTCACCATTGGTGCCCACACGAGAGACTCATTTTCTTCGATACTGCCAACAAAATGTTGAGGAGGGGACTTGGGCGATTGTCGATTTCCCCATTGATAGCTTCCATAACAGTCTTCAAGATTCCTTTCCTAGGTATCGTAGACGACCCTCTGGCTGCATTATCCAAGATATGCCTAATGGATACTCGAGGGTGACATGGATAGAACATGCAGAGATAGATGACAAACCAGTCCATCAGATATTTAATCACATTGTAAACAGTGGGATAGCGTTCGGGGCGCAACGCTGGTTAGCCGTCTTGCAACGCGAATGTGAGAGGCTTGCAAGCCTCATGGCCAGAAATATAGCCGACCTTGGAGTCATACCCTCTCCGGAAGCAAGGAAGAACCTAATGAAACTGGCACAAAGAATGATAAGAACATTCTGCTACAACATCAGCACTTCAGGAGGTCAGTCGTGGACGGCTCTCTCGGATTCTTCCGACGACACTGTTCGAATAACCACCAGGAAAAACACAGAACCAGGCCAACCCAATGGTGTGATTCTCTGTGCCGTCTCGACAACTTGGCTGCCGTTCTCTCACCATCAAGTCTTCGATCTCTTGCGAGATGAACGCCGCAGATCTCAGCTGGATGTTCTTTCCAGTGGGAATTCCTTACACGAGGTGGCGCACATCGCCAATGGCTCTCATCCAGGGAACTGCATTTCTCTTCTTCGCATAAATTCAGCCAGCAACTCATCCCAGAACGTAGAGCTCATGTTGCAAGAGAGCTGCACTGACCAGGCCGGCAGCCTCGTAGTCTACACGACTGTCGACGTCGATGCTATCCAGCTAGCAATGAGCGGTGAGGATCCATCCTACATCCCCCTCCTTCCAATGGGGTTCTTCGTAGTTCCGGTAGGTCATCCAGTCAACAACGAGGGAAGCATGAACGGCAATGGCAACACCATCCAATCTGCAGAGAATGGAAATGGGCCAACTTCAGGCTGTCTACTAACAGTAGGCCTCCAGGTACTGGCGAGCACCATCCCATCTGCAAAACTCAACCTCTCAAGCGTCACAGCCATCAACAACCACATATGTAACGCGGTGCACCAAATCAATGCTGCTCTAAGCAACAGCAGTAGCAACCTTGTTGGTGTCGGCGGCGGTGGCACCGAGCCGACAACTGCATCTGGGCAATAG 1836 0.4978 MSFDEQHLRIENARLKDELERLSCVASRYSGRPIQALGPPPPLLLPSLDLDMGIYSRHFQEPMGTCTDMMPVSAMPENPHLAGGNLIMEQEKHLALELAMTAMDELVKMCQVTEPLWIRSSNGTMEMLNLEEHTRMFPWPMNLNKHQSELRTEGTRDSAVVIINSITLVDAFLDANKWMELFPSIVSRAKTVQIITSGVSGHANGSLHLMYAEFQVLSPLVPTRETHFLRYCQQNVEEGTWAIVDFPIDSFHNSLQDSFPRYRRRPSGCIIQDMPNGYSRVTWIEHAEIDDKPVHQIFNHIVNSGIAFGAQRWLAVLQRECERLASLMARNIADLGVIPSPEARKNLMKLAQRMIRTFCYNISTSGGQSWTALSDSSDDTVRITTRKNTEPGQPNGVILCAVSTTWLPFSHHQVFDLLRDERRRSQLDVLSSGNSLHEVAHIANGSHPGNCISLLRINSASNSSQNVELMLQESCTDQAGSLVVYTTVDVDAIQLAMSGEDPSYIPLLPMGFFVVPVGHPVNNEGSMNGNGNTIQSAENGNGPTSGCLLTVGLQVLASTIPSAKLNLSSVTAINNHICNAVHQINAALSNSSSNLVGVGGGGTEPTTASGQ* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01185 611 SMART START_1 97 323 IPR002913 GO:0008289
Eupl08g01185 611 Gene3D - 150 323 IPR023393 -
Eupl08g01185 611 Pfam START domain 98 323 IPR002913 GO:0008289
Eupl08g01185 611 Coils Coil 5 25 - -
Eupl08g01185 611 FunFam Homeobox-leucine zipper protein GLABRA 2 97 322 - -
Eupl08g01185 611 SUPERFAMILY Bet v1-like 348 584 - -
Eupl08g01185 611 SUPERFAMILY Bet v1-like 92 325 - -
Eupl08g01185 611 ProSiteProfiles START domain profile. 88 326 IPR002913 GO:0008289
Eupl08g01185 611 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 588 IPR042160 -
Eupl08g01185 611 CDD START_ArGLABRA2_like 92 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01185 Eupl-Chr8 31877823 31883677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01185 3 597 Homeobox Transcription Factor Family AT5G46880 59.516 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01185 - - nnu:104588819 971.844