Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01175 ATGGCAATTATGGCATTGGTGAGAGAGAGGCGGCATCAGCAAGCACTCAGGCTTCCGTTACCACCTCCAATTCTAGCACCAGAATTCTGTCAACGGATTCCGTTACCATTACCATTTCTACCCAATAGTCCTGATTCACCTGGCATAGAAAGTCTCTCTGACCTTGAGAAGTTAACAGTCCTCGGCCATGGCAATGGTGGCACTGTCTACAAGGTCCGACACCGTCGGACTTCCTCCATTTATGCACTGAAAGTCCTCCGATTCAATCAAGACAGTGTCGGAATTCGGGCAGAGTCAGCCCGCGAAGCCGAGATTCTTAAACGAGTCGATTCACAGTATGTGATAAGGTGTCATGGCGTGTTCGATAGCGGGACCAATGCAGATAATGGTGATCTTTGCTTCGTGATGGAGTACATGGAAGCAGGATCATTGCATGATCTGTTACGAGTCCGTCGAAAGCTACCTGAGAATATCATCTCTGTTGTGGCAGGTCGGGTCTTAGAAGGGCTCAGGTATCTGCATGGGATGCACATTGTACATAGAGATATCAAGCCATCAAATTTGCTGATCAACAGTCGGGGAGAGGTCAAGATTGCAGATTTTGGGGTCAGCCGGGTGCTAGCGGGGATGCTCGACACATGTGACCCATATGCGGGGACGTGCGCATACATGAGCCCGGAGAGGTTCGACCCAGACAGGTGGATTGGAGACCAGTATGATGGGTTTGCAGGAGATGTGTGGGCATTGGGAGTGGCTGTGTTGGAATGCCATATGGGTCACTTTCCTCTGATTGCACCTGGGCAGAAGCCCGATTGGGCGACACTAATGTGCACCGTATGCTTCAGTGAGCCACCGGAGATGCAGGAGACAGCGTCATTGGAATTCCAGAGCTTTGTTCATCGATGCTTGGAGAAAGACTGGAGGAGGAGAGGGACTGTCTCGGAGCTTCTTAGCCACCCTTTTGTGGCAAGGTGCACCTCTTCGACAGAAGGTCTGGTTGATGATTTAAGTGGTTGA 1017 0.5074 MAIMALVRERRHQQALRLPLPPPILAPEFCQRIPLPLPFLPNSPDSPGIESLSDLEKLTVLGHGNGGTVYKVRHRRTSSIYALKVLRFNQDSVGIRAESAREAEILKRVDSQYVIRCHGVFDSGTNADNGDLCFVMEYMEAGSLHDLLRVRRKLPENIISVVAGRVLEGLRYLHGMHIVHRDIKPSNLLINSRGEVKIADFGVSRVLAGMLDTCDPYAGTCAYMSPERFDPDRWIGDQYDGFAGDVWALGVAVLECHMGHFPLIAPGQKPDWATLMCTVCFSEPPEMQETASLEFQSFVHRCLEKDWRRRGTVSELLSHPFVARCTSSTEGLVDDLSG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01175 338 Gene3D Phosphorylase Kinase; domain 1 43 135 - -
Eupl08g01175 338 FunFam Mitogen-activated protein kinase 2 141 332 - -
Eupl08g01175 338 SMART serkin_6 55 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01175 338 FunFam Mitogen-activated protein kinase kinase 1 40 140 - -
Eupl08g01175 338 ProSiteProfiles Protein kinase domain profile. 55 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01175 338 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 51 326 - -
Eupl08g01175 338 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Eupl08g01175 338 Gene3D Transferase(Phosphotransferase) domain 1 136 333 - -
Eupl08g01175 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Eupl08g01175 338 CDD PKc_MAPKK_plant_like 53 325 - -
Eupl08g01175 338 SUPERFAMILY Protein kinase-like (PK-like) 53 325 IPR011009 -
Eupl08g01175 338 Pfam Protein kinase domain 56 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01175 Eupl-Chr8 31724580 31725726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01175 4 322 MAP Kinase Kinase Gene Family AT1G32320 54.348 2.93e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Eupl08g01175 Pkinase 9.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01175 K20604 - nnu:104588609 479.944