Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01174 ATGATGGATCCTTTGGCAAGTGATTCCAACATTCATTGTGAACATTTTGGATTCTCCGGAGAAGGAATTAGTCTTCACTCCAAAGAAGAAAATGATAAAGGTAAGGCGAAGCATGATCCACAAACACATGGTTGCAACACACAACACCATCCGACTCAGCTAGGAGCCCAACCGCAGTTGGAGCATACCGAGACTGTAGAGGAAGATGAATTTTGGCCGCTTTCAGCAAAGCCTTACTTTCATTGCATTCTTGCAAAATCACATGTTAGTTCCAGATATCAGATGGTGGTTCCACCAAAAATGCATTCATCACTTCCTCAAGTTGAGGTTCCAGTGGTTCTTTCTTGTCGGAACAAGAGCTGGGAGATGAAATACTATGGGGATCGTAGCTACAAACGGTTCGACCCCGGCTGGAGAAAATTTGCTAATGATAACAACCTCAAGGTCGGAGATGGATGCGTCTTTGAACTCATGGAGAATAACAATGAGGGTCTCAAGTTCAGAGTGCAAATTCTCAGTGGTGAGATCCCATCTGAATTCATTGACAGAGTTGATGGTAATAGTTCAAATACTCCTATCATAATTGAATAG 591 0.4264 MMDPLASDSNIHCEHFGFSGEGISLHSKEENDKGKAKHDPQTHGCNTQHHPTQLGAQPQLEHTETVEEDEFWPLSAKPYFHCILAKSHVSSRYQMVVPPKMHSSLPQVEVPVVLSCRNKSWEMKYYGDRSYKRFDPGWRKFANDNNLKVGDGCVFELMENNNEGLKFRVQILSGEIPSEFIDRVDGNSSNTPIIIE* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01174 196 MobiDBLite consensus disorder prediction 45 60 - -
Eupl08g01174 196 Gene3D - 60 174 IPR015300 -
Eupl08g01174 196 MobiDBLite consensus disorder prediction 22 65 - -
Eupl08g01174 196 MobiDBLite consensus disorder prediction 25 44 - -
Eupl08g01174 196 CDD B3_DNA 78 173 IPR003340 GO:0003677
Eupl08g01174 196 SUPERFAMILY DNA-binding pseudobarrel domain 77 171 IPR015300 -
Eupl08g01174 196 SMART B3_2 80 175 IPR003340 GO:0003677
Eupl08g01174 196 ProSiteProfiles B3 DNA-binding domain profile. 80 175 IPR003340 GO:0003677
Eupl08g01174 196 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 63 175 IPR044837 -
Eupl08g01174 196 Pfam B3 DNA binding domain 81 173 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01174 80 175 REM Transcription Factor Family AT4G33280 34.343 1.80e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl08g01174 B3 1.7e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01174 - - ming:122081078 208.379