Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01172 ATGGATGGAGTTCATGGTAATGCGACGATCGCCAGCTCGAATCCGAACGCGAATGCTCCACCACCGTTCCTCAGCAAGACCTACGACATGGTTGACGATCCGTCGACGGATTCAGTCGTGTCCTGGGGCACTAGCAACAACAGCTTTGTTGTCTGGAATCCGCCGGAGTTTGCGAGGGATCTTTTGCCCAAATACTTTAAGCACAATAACTTCTCCAGCTTTGTCAGGCAGTTGAACACATACGGTTTCAGGAAGGTTGATCCTGACCGCTGGGAATTTGCAAACGAGGGGTTCCTAAGAGGTCAAAAACACAAGTTGAAGAGTATTAATAGGCGAAAATCCTCTAATGTACATAGTCATCAACAGCAACCTCAAGGACAGAGTACTTCAGTTGGGGCATGTGTTGAGGTGGGGAAATTTGGGCTTGAGGAAGAGATAGAGAGACTTAAAAGGGATAAGAATGTGCTTATGCAGGAACTGGTCAGGCTGAGACAGCAGCAACAGACAACTGATCACCAGTTGCAGACATTGGGGCAGCGCCTTCACGGTATGGAGCAGCGGCAGCAACAAATGATGTCATTCCTGGCAAAGGCCATGCAGAGCCCTGGATTCTTAGCGCAACTGGTGCAGCAGCAGAATGAGAGTAACAGGCGCATCACTGGAGTTAACAAGAAACGGAGACTTCCCAAACATGAAGATAACCCTGGGGGCGAGCATGCCACTGCTCCCGATGGACAGATCGTTAAGTATCAGCCTCTAATGAATGAAGCAGCAAAAGCAATGCTCAGGCAGATACTGAAGATCGATGCATCTCCCATGCTGGAAACGAACAACAATCCTGATAGTTTCTTGATCGATGATGTTCCCTCACCGTCCAATGCGTTAGACAGTGGGGACTCTTCAAGTCAGTTATCAGGAGTGACACTTTCAGAGGTCTCTCCAACTTCTGGGCATTCATATTTGCCATTGTCCTCGGGGTTTTCAGGGATTCGTACCTCAGCTGCCATATCAGAGATTCAATCTCCCCCTGGTGTAGTAACAGACATGGTTACAACAGATCAATTGCCAGATATGAGTGTGTTGGATGCAGTGCAAGAGGGGACCATCACTCCTTGCCAGGCAGACCTGGTGATGCCTGAGTTCCCTCAAGTACAAGAAATGGTGCCAGAAAGAAATGTGGTTGGCATTCCTGGAGCTAATTATGGGAGTCCCGAGACAGGGAATGGTGGGTACATGGATCCCATGTGCGTGGGAGTCGATGAGACAATGCCCATAGAAACTAACAAGTTCTCACCTGATCCTGATATGGATATCTTGCTGGATGGGATCCCTAAGCTTCCAGGTATAAATGATGTCTTCTGGGAACAATTTCTCACAGCTAGCCCACTCTCTGGGGACACAGATGAGATCGACTCAAGCACACTGGAAGGTGCTGCCAAGGAGGAAGTGCAGCCAGGGCTGGATAATGGATGGGATAAGGCTCAGCATATGGACCAGCTTACCGAACAGATGTGGCTTCTTGCGTCGGAGACCAAAGTCGGGTGA 1545 0.4919 MDGVHGNATIASSNPNANAPPPFLSKTYDMVDDPSTDSVVSWGTSNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHKLKSINRRKSSNVHSHQQQPQGQSTSVGACVEVGKFGLEEEIERLKRDKNVLMQELVRLRQQQQTTDHQLQTLGQRLHGMEQRQQQMMSFLAKAMQSPGFLAQLVQQQNESNRRITGVNKKRRLPKHEDNPGGEHATAPDGQIVKYQPLMNEAAKAMLRQILKIDASPMLETNNNPDSFLIDDVPSPSNALDSGDSSSQLSGVTLSEVSPTSGHSYLPLSSGFSGIRTSAAISEIQSPPGVVTDMVTTDQLPDMSVLDAVQEGTITPCQADLVMPEFPQVQEMVPERNVVGIPGANYGSPETGNGGYMDPMCVGVDETMPIETNKFSPDPDMDILLDGIPKLPGINDVFWEQFLTASPLSGDTDEIDSSTLEGAAKEEVQPGLDNGWDKAQHMDQLTEQMWLLASETKVG* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01172 514 MobiDBLite consensus disorder prediction 106 130 - -
Eupl08g01172 514 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl08g01172 514 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl08g01172 514 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl08g01172 514 FunFam Heat shock transcription factor 1 16 113 - -
Eupl08g01172 514 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl08g01172 514 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl08g01172 514 MobiDBLite consensus disorder prediction 115 130 - -
Eupl08g01172 514 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 273 IPR027725 -
Eupl08g01172 514 Coils Coil 139 166 - -
Eupl08g01172 514 Gene3D - 15 113 IPR036388 -
Eupl08g01172 514 MobiDBLite consensus disorder prediction 7 21 - -
Eupl08g01172 514 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl08g01172 514 MobiDBLite consensus disorder prediction 281 318 - -
Eupl08g01172 514 MobiDBLite consensus disorder prediction 212 246 - -
Eupl08g01172 514 MobiDBLite consensus disorder prediction 1 25 - -
Eupl08g01172 514 MobiDBLite consensus disorder prediction 293 318 - -
Eupl08g01172 514 SUPERFAMILY "Winged helix" DNA-binding domain 18 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01172 Eupl-Chr8 31678545 31687664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01172 7 512 HSF AT5G16820 53.801 1.07e-158 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl08g01172 HSF_DNA-bind 2.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01172 K09419 - nnu:104588809 760.37