Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01169 ATGGTTTCAAGGTCTTATTCCAATCTTTTGGACCTTGCTTCTGGTGATTCTTTGACCTTTGGTCGAGTTGGGAAGAGGCTCCCTAGAGTGATGACTGTGGCTGGGATAATCTCTGAACTAGATGATGAGAATAGTGTTGGCTCCGATGTTCCCTCTTCTATCTCTCAGGAGCGGATGATCATCGTGGGTAACCAGCTTCCACTTCGAGCCCACCGAAGATCTGATGATGATGGGGGGTGGTACTTCAGCTGGGATGAGGACTCCCTTCTTTTACAACTCAAGGATGGCCTCGGGGAAGATGTGGAAGTCATCTACGTTGGTTGCTTGAGAGAGGAGATTGATCTGAGTGAACAGGATGATGTTGCCCAGACCTTGCTCGATACCTTCAAGTGCGTTCCCGCATTCATTCCTCCCGACCTCTTCAGTAAATTTTACCATGGTTTCTGTAAGCAGCATCTGTGGCCTTTGTTTCACTACATGCTTCCTCTCTCTCCAGATCTTGGTGGGAGGTTTGATAGGTCTCTCTGGCAAGCGTATGTCTCAGTTAACAAGATATTTGCAGACAAGGTGATGGAAGTGATCAGCCCCGATGACGATTTTGTATGGGTCCATGACTACCATTTGATGGTGTTGCCAACCTTTTTGAGAAAGAGGTTTAATAGGGTGAAGCTTGGGTTCTTCCTCCATAGTCCCTTCCCTTCATCTGAGATTTATCGAACACTTCCTGTTAGAGATGAGCTTCTCCGAGCCCTCTTAAACTCTGACCTTATTGGTTTCCATACGTTTGACTATGCCAGACACTTCCTCTCATGCTGTAGTAGAATGCTCGGCCTTGCTTATCAGTCTAAACGGGGCTACATAGGGCTTGAGTACTACGGTCGCACTGTCAGCATTAAAATTCTCCCTGTTGGGATTCACATGGGCCAGCTTCGGTCCGTGATGAATCTTCCTGAGACTGAATCCAGGGTTGCAGAGCTAAGGGATCAGTTTAGGGATCATACAGTATTGCTCGGGGTGGATGACATGGACATCTTCAAAGGAATCAGCTTAAAACTGTTGGCCCTTGAACAGTTGCTCATACAACATCCTGATTGGAGGGGGAAAGTTGTGTTGATTCAGATTGCGAACCCTGCAAGAGGCCGAGGGAGAGATGTACAGGAGGTTCAATCGGAGACTTATTCCACAGCAAAGAGGATTAACGAGACGTTTGGGCTGCCTGGATATGATCCTGTGGTTTTGATTGACACCCCACTTCAGTTCTATGAGAGAATTGCATATTACATGATTGCTGAGTGCTGTCTCGTTACGGCTGTGAGGGATGGGATGAATCTCATACCCTACGAATACATAATATGCCGGCAAGGGAATGAAAAGCTAGATGAGACCTTGCAACTGGACCCATCGGCCCCGAAGAAGAGCATGCTGGTGGTGTCTGAGTTCATTGGGTGCTCTCCGTCACTCAGTGGGGCCATCCGTGTCAATCCATGGAACATTGATGCTGTGGCTGAAGCTATGGATTCTGCCTTAGCAGTTCCCGAGTCTGAAAAACAGTTACGGCACGAAAAGCACTATAGATATGTGAGTACACATGATGTCGGGTACTGGGCACATAGCTTTTTACAGGATCTTGAAAGGGCATGTAAGGACCATTTGAGGAGGAGGTGCTGGGGCATTGGTTTTGGTTTAGGGTTTAGGGTCATCGCTCTTGATCCAAATTTCAGGAAACTTTCGGTTGAGCATATAGTTTCTGCATACAAAAGAACCAAGAACCGAGCGATTCTCTTAGATTATGATGGTACTATGATGCCACAGACTTCCATCAACAAAACTCCAAATCCTGAGGCGATTGGTTTCTTGAACAGCTTGTGCAGAGACCCAAAGAATGTTGTCTTCCTCGTGAGTGGGAGAGACAAGAAGACTCTAACTGAGTGGTTCTCATCATGTGAAAAGCTTGGAATCGCTGCAGAACATGGTTACTTTGTGAGGTCGAATCACAATGAGGAATGGGTAACTTGTGTGCCCGTGACGGACTTTGATTGGAAACAGACTGCAGAGCCTGTGATGAAGTTGTACACTGAAACAACGGATGGTTCTACTATTGAGACTAAAGAGAGTGCACTTGTTTGGCATTACCAGTATGCCGATCCGGATTTCGGATCATGCCAGGCTAAGGAACTTCTTGATCACCTTGAAAGTGTTCTTGCCAACGAGCCAGTCTCCGTCAAGAGTGGACAACACATTGTTGAAGTTAAGCCTCAGGGTGTCAGTAAGGGCTTGGTTGCCGAACACCTACTAGCAACAATGCAACAGAAGGGAATGCTTCCAGATTTTGTGCTGTGCATTGGCGATGATCGATCAGATGAGGACATGTTTGAGGTCATCATGAGTGCCATGATGGGTCCTTCACTCTCTCCGGTGGCTGAGGTGTTTGCATGCACAGTTGGCCAGAAGCCCAGCAAAGCAAAGTATTATTTGGAAGACACTACAGAGATAGTCAAAATGTTGCAGGGCCTTGCCACAGCTTCCGACCAGGCGGCAAGGAACGCTTCTCAAGTTTTCCACCGTAGTGATTGTTGA 2577 0.4711 MVSRSYSNLLDLASGDSLTFGRVGKRLPRVMTVAGIISELDDENSVGSDVPSSISQERMIIVGNQLPLRAHRRSDDDGGWYFSWDEDSLLLQLKDGLGEDVEVIYVGCLREEIDLSEQDDVAQTLLDTFKCVPAFIPPDLFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLAYQSKRGYIGLEYYGRTVSIKILPVGIHMGQLRSVMNLPETESRVAELRDQFRDHTVLLGVDDMDIFKGISLKLLALEQLLIQHPDWRGKVVLIQIANPARGRGRDVQEVQSETYSTAKRINETFGLPGYDPVVLIDTPLQFYERIAYYMIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDETLQLDPSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALAVPESEKQLRHEKHYRYVSTHDVGYWAHSFLQDLERACKDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKNRAILLDYDGTMMPQTSINKTPNPEAIGFLNSLCRDPKNVVFLVSGRDKKTLTEWFSSCEKLGIAAEHGYFVRSNHNEEWVTCVPVTDFDWKQTAEPVMKLYTETTDGSTIETKESALVWHYQYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVSKGLVAEHLLATMQQKGMLPDFVLCIGDDRSDEDMFEVIMSAMMGPSLSPVAEVFACTVGQKPSKAKYYLEDTTEIVKMLQGLATASDQAARNASQVFHRSDC* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01169 858 CDD HAD_TPP 592 833 - -
Eupl08g01169 858 CDD GT20_TPS 58 544 IPR001830 GO:0003824|GO:0005992
Eupl08g01169 858 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 51 311 - -
Eupl08g01169 858 NCBIfam trehalose-phosphatase 589 839 IPR003337 GO:0003824|GO:0005992
Eupl08g01169 858 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 58 548 - -
Eupl08g01169 858 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Eupl08g01169 858 SUPERFAMILY HAD-like 591 839 IPR036412 -
Eupl08g01169 858 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Eupl08g01169 858 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Eupl08g01169 858 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 840 IPR001830 GO:0003824|GO:0005992
Eupl08g01169 858 Pfam Trehalose-phosphatase 594 828 IPR003337 GO:0003824|GO:0005992
Eupl08g01169 858 NCBIfam HAD-IIB family hydrolase 593 795 IPR006379 -
Eupl08g01169 858 Gene3D - 590 701 IPR023214 -
Eupl08g01169 858 Gene3D - 720 855 IPR023214 -
Eupl08g01169 858 Gene3D Glycogen Phosphorylase B; 312 528 - -
Eupl08g01169 858 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Eupl08g01169 858 Pfam Glycosyltransferase family 20 58 544 IPR001830 GO:0003824|GO:0005992
Eupl08g01169 858 Gene3D Glycogen Phosphorylase B; 51 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01169 Eupl-Chr8 31623394 31630932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01169 1 850 Trehalose Biosynthesis Gene Families AT4G17770 78.996 0.0 1438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01169 K16055 - psom:113297413 1604.73