Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01161 ATGAACGAGAAGCCCACCCCCAACATTACTCTCCCTGGAACTCTCAGGCTCTTCTTCCATGACTGCTTCGTTCAGGGTTGTGATGGATCTGTGTTGATTGCATCAACGGCGGATAACCGGGCGGAGAGGGATGCACCTATCAGCCTGTCTCTTGCTGGGGACGGTTTCGATATTGTAGTTCGTGCTAAGAAGGTTCTAGAAGAATCATGCCCGGGTGTCGTGTCATGTGCGGATATCCTCGCAATCTTAGCTCGGGATGTCGTCGTCACGTTGCAGGGCCCACACTGGGAGGTGGAGAAGGGGAGGAGAGACGGAAGGATCTCCAAGGCCGACAATGTCGCTGCACAGATCCCACGTGCTGAATCAAACCTGACCGATCTCGTCCGTCTGTTCCAATCCAAGGGACTCAAACAACTCGATCTCCTCACACTCTCAGGGGCCCACACTGTCGGTTTTCTCACTGCTCCCAATTCGCCAACCGTATCCACAACCATGACCCCACCATGGACCCCACAATGCGAGATGATCTCATCAGCGCCTGTCCATTTCCCAAGATAG 558 0.5412 MNEKPTPNITLPGTLRLFFHDCFVQGCDGSVLIASTADNRAERDAPISLSLAGDGFDIVVRAKKVLEESCPGVVSCADILAILARDVVVTLQGPHWEVEKGRRDGRISKADNVAAQIPRAESNLTDLVRLFQSKGLKQLDLLTLSGAHTVGFLTAPNSPTVSTTMTPPWTPQCEMISSAPVHFPR* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01161 185 SUPERFAMILY Heme-dependent peroxidases 10 167 IPR010255 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PANTHER - 9 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 Gene3D Peroxidase, domain 2 119 153 - -
Eupl08g01161 185 ProSiteProfiles Plant heme peroxidase family profile. 12 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PRINTS Haem peroxidase superfamily signature 140 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PRINTS Haem peroxidase superfamily signature 92 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PRINTS Haem peroxidase superfamily signature 74 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PRINTS Haem peroxidase superfamily signature 11 25 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 Pfam Peroxidase 12 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 Gene3D - 11 118 - -
Eupl08g01161 185 PRINTS Plant peroxidase signature 92 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PRINTS Plant peroxidase signature 54 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PRINTS Plant peroxidase signature 13 33 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PRINTS Plant peroxidase signature 139 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01161 185 PRINTS Plant peroxidase signature 73 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01161 Eupl-Chr8 31562990 31565465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01161 10 151 Peroxidase AT5G14130 57.746 1.39e-52 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01161 K00430 - ming:122070724 206.068