Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01134 ATGCCGAACACCGATCCCGACTCGTTCCCCAAGTCAATCCCACGCACTTCTTCTGAACCCAACATCTCCAAAACCAAGCACCATCACCCCCCTCCTTCGACTCGTTCGTCGACAACTCGGAGGAAGGGAGGTAAGTCATCAGCCAGAGCTTGGAAACTGAGTTCAAAAGACTCAGATTTGACAGAAGAGAAACTCCAGAAGTATAACCAGAGAAACGCTTCAAATGACAAGAAGAACTCGACATGTAGTCCATATTACAAAGGACTCACTGATTCAACTCTTTATATAACTCGACAAAGACTCGCTGGGTTGAGTCCAGGGAGAGAAAGCCAGGGCACTGCAGTGACTTCAAGCTCTATATCGACAGTCTTGGTGAGGTTACAAGAGTGGAGTACTTCTTGTTTTAAAGGTAAGGTAGACTCGAGAGTCTCCATGTCGACGAGTACTTCGACGAGAACATCGAGTACTTCTTTATTTTCTTCTTCGTCGTCGACGGCGATGAAAGAAGCGAAGGAGATATGGTTGAAGAATACGGAAGTTAGTTCGATCGATTCAAAGATTTCACGGTTCGAGAAGAAGCCATTGAGGGAGAGAGTTTCAGCAGCAGTTGTTGCAACTGCACCTGCAACTGCAACTGCAACTGCGCCTGCACCTGCAACTGCAACTGCACCACCGCCAGTTCAGGTTACCAAGAGAGTGATTGTGGTGGGGGGAGAAAAGCCCAAGGAGGGAAGGATGAACAACAAGGAGAGGGAGTTTGTTTGGGCAAACGAGTATCGACCTAGAGCTTTGAAGGAGTTCATCTGCAATCGAGATAAGGCGGAACAGCTACATGCCTTGGTGAGAAAGGGACAATGTAGTCATTATATATTTGAAGGTCCTCCAGGAGTAGGAAAGAGGACCATGGTTTGGGCTTTGCTACGTGAAGTTTTTGGACCTGAAAAACTAAGGGTAAGATTACAAATCACAAATGTCTATGATTTGATATTTTTTGGAGAATTTGAGGCCAGCATCAAAGTTAATGTGAAAGTATCCTCTCAACACATCGAGATCAATCTATCTGAACTGTATGGGTACGAAAAGCATGTTATTGTGGCACTGTTAAAGGAAACACAAGTATTGAACACAGAAATGCAGTGTGATCATACTAACTGCCGAGCGATTATTCTATATGAGGCAGACAAGCTCTCTGCAGATGCCCAACTCTACATTCGATGGCTAATAGAAAGATCTAAGGGATGTACCAAAATCTTCTTTTGCTGCACCGATGTCTCCAAGCTTCAGCCCATCAAACCCCTCTGCACAATTATTCAGCTTCTTCCACCATCAAATAAGGAGATTGTTGAAGTCTTGGAGTTTATCGCCGAAAAAGAAGATATACAATTGCCTCACCAACTAGCAGAAAGAATTGCCGAGAAATCCAAGCATAACCTCCGACAAGCAATTCGGTCATTCGAAGCCTCCTGGCAGCTGAATTATCCATTTAAAGAAGATCAGGTGATTATAACTGGATGGGAAGATGATATTGCCAAAATTGCTAAGAATATCATTGAAGAGCAAAGCCCAAGGCAGCTATATGTTATCCGCGGGAAGCTTCAGAATCTTATAGAGCACAGTGTATCCCCTGCATTTATTTTCAGTACTCTAGTCCAAGAACTGAAGAAGCATTTATGCGAAGAGTTCCAGACCAAACTCGATGTTTTATATCAGGAATATAATAGGGATAGTGCAGGTAACTCGGAGGAGGAGAAATCGTTAGTCCTCTTACGGAGCCGATATGAGGAATCGGGTAAGAGGAATAATGACCTGAGAAAGAATGTTCAGCATTTCATGAGGATCGAAGAATTTACAGCGAAATTCATGAGCTTCTATAAATCTTGCATGATGAAGAGCATAGGAGGCCCAAATGGGTATGCCAGCGAAAGGGACTCAGGCTCAAGGATGTAG 1947 0.4397 MPNTDPDSFPKSIPRTSSEPNISKTKHHHPPPSTRSSTTRRKGGKSSARAWKLSSKDSDLTEEKLQKYNQRNASNDKKNSTCSPYYKGLTDSTLYITRQRLAGLSPGRESQGTAVTSSSISTVLVRLQEWSTSCFKGKVDSRVSMSTSTSTRTSSTSLFSSSSSTAMKEAKEIWLKNTEVSSIDSKISRFEKKPLRERVSAAVVATAPATATATAPAPATATAPPPVQVTKRVIVVGGEKPKEGRMNNKEREFVWANEYRPRALKEFICNRDKAEQLHALVRKGQCSHYIFEGPPGVGKRTMVWALLREVFGPEKLRVRLQITNVYDLIFFGEFEASIKVNVKVSSQHIEINLSELYGYEKHVIVALLKETQVLNTEMQCDHTNCRAIILYEADKLSADAQLYIRWLIERSKGCTKIFFCCTDVSKLQPIKPLCTIIQLLPPSNKEIVEVLEFIAEKEDIQLPHQLAERIAEKSKHNLRQAIRSFEASWQLNYPFKEDQVIITGWEDDIAKIAKNIIEEQSPRQLYVIRGKLQNLIEHSVSPAFIFSTLVQELKKHLCEEFQTKLDVLYQEYNRDSAGNSEEEKSLVLLRSRYEESGKRNNDLRKNVQHFMRIEEFTAKFMSFYKSCMMKSIGGPNGYASERDSGSRM* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01134 648 Gene3D - 504 624 - -
Eupl08g01134 648 MobiDBLite consensus disorder prediction 1 20 - -
Eupl08g01134 648 SUPERFAMILY post-AAA+ oligomerization domain-like 504 567 IPR008921 GO:0003677|GO:0006260
Eupl08g01134 648 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 255 565 - -
Eupl08g01134 648 Gene3D - 253 442 IPR027417 -
Eupl08g01134 648 MobiDBLite consensus disorder prediction 1 59 - -
Eupl08g01134 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 253 490 IPR027417 -
Eupl08g01134 648 Gene3D - 443 503 - -
Eupl08g01134 648 FunFam replication factor C subunit 3 443 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01134 Eupl-Chr8 31159641 31164595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01134 253 633 Core DNA Replication Machinery Family AT5G27740 32.383 1.52e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01134 K10756 - msin:131232934 582.408