Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01121 ATGGCTTCCGTCTTTACTCATCTTCTCTGCCTCATATTTCTGCTGCTCCCTCCTTCCGCTGTATCTCAAACTTCCGATAAGAACATTCCCTTGGGCGCTTCTCTAATAAGCCATAATGAAAGCTCTTTTTGGCTTTCACCTTCTGGTGAATTCGCTTTTGGCTTTTACCGCCTCGAAGAAGATCTCTTCTTGCTAGCAATCTGGTTTGCCAAAATTGAAAATGTAAAATCCATTATTTGGACAGCATATGAAGGTAAGCCGGTGCATAGAGGATCGAGAATTGAGCTGACAACTGAGGGTGAGCTTATTCTCAGAGACCGCAATAACTCACAGCTTTGGAAACCACCCATGGATGGTAGCCAAGCTTCCTCCGCTGCCATGCTTGACACAGGCAACTTCGTGCTCAGGAACGAATCCAATAACATATGGGAAAGCTTTAACTTTCCGACCGACACCATCTTGCCTACCCAGATACTAAATCGTGGCGGTAAGCTCTTGTCTCGACAAACTGACGACGACTACTCAACCGGAAAGTTCAAACTTGAACTACAACTCGATGGCAACCTCGTGATGTATATCACAGCTCAGCTTACTGGAGACAATTATGCCCATTACTGGAGTAGCGACACTGTTGGATTTGGTTCACAGCTGATCTTCAACCAGTCTGGCGATATCTATCTAACTGTACCGAATAGGACAAAGGACTTCTATATGACAGAAAAGATGCCAGTTTCGACAAGGGATTTCTACCAAAGAGCCACATTTGATTTTGATGGAGTTTTCAGGCAATACAACTTCCCGAAGACCTCCAATGATGGGAGGTGGTCATCACAATCCTGGTCTGTTGCTTGGTATAAGCCTCCAAACATTTGCACAGCAATCGTTAGTGGTGTCGGCGGCGGAACTTGTGGGTATAACAGCTACTGCAGACTAGATGACAAGCTGAGGCCTAAGTGTGAATGCCCACCTGAGTATGTCCCCTCGGATCCGAAAAACGCATTCAAAGGATGCAAACAAAACTTCCTTCCACTGAGTTGTGAGACAGATATTGGATTGATGGCAGCCGGCGGATTCGAAATGAGGGAGATTCCTAACACAGACTGGCCGGGATCTGACTACCGATCTTATAAAGCAATGGATGAAGACAAGTGCAGAAAATTTTGCTTGGATGATTGTTTCTGTGTAGGTGCGGTCATCGGAGCAGGGGACTGCTGGTTGAAGTTTTTCCCACTCCAAAATGGGAGGATGGACCCCGGTAATGAATTTAAGGCTCTCATCAAAGTACGTAATTCTTCTTCACTAACTGTTCCTCATCCAGACTTTGGCGGAAACAAGAAAGACAAGGAAGACAATGACAAGTTGATCTTGCTCGGATCGATTTTTTTAGGCAGCTCCGTGTTTCTTAATTTTCTACTCTTCTTGGCGATTTCTCTGGCCGTCTTTTACATCTTGTGCCAGAAGAAACTGTTCAAAATACGACCAGAGCCCAGTACGTTTGAAATGAACCTACGTTCTTTTACTTACAAAGAGCTTGAAGAAGCTACTGATTGTTTCAAGGAAGAACTGGGTAAGGGTGCTTTTTCTACTGTTTATAAAGGGGTTCTAAGATTGGGTAACAGAAGTCTTGTTGCAGTTAAAAAGTTAAACAATGGGGTGCAAGAAATTGACAACGAATTTATAGCCGAAGTGAGCGCGATCGGTGGGACCAATCACAAGAACCTAGTCCAACTGCTCGGATTCTGTGACGAGGGTTCCCACCGGCTTCTGGTGTATGAGTTCATGAGAAATGGCTCCTTAGCAAGCTTCCTCTTCGGAAATTCAAGACCTGACTGGTATCGAAGAATTCAAATTGCCTTTGGGATTGCTCGAGGACTCACATACTTACATGAAGAATGCAGCACTCATGTCATCCATTGCGATGTAAAGCCTCAAAACATACTTATAGATGATTCTCTTGAGGCGAGAATTTCTGACTTTGGATTGGCAAAGCTTCTTAAGACTGATCAAAGTCGAACTAGTACTGGCATCAGAGGGACAAGAGGATATGTAGCCCCTGAGTGGTTCAAGAACATGGCAATCACAGCTAAGGTGGATGTTTACAGTTTTGGAATCGTGTTACTGGAGATTATATGTTGCAGGAGGAATGTTGAATTCGGGCTGGAGGATGAAGAAAAGGCGATACTATCAGATTGGGCTTATGATTGCTTTAGAGGAGGGAAACTCCATTTGTTAGTGGGGAATGATGAAGAAGCAATGAATGATAGTAGGAGGTTGGAGAAGTGGGTCATGGTGGCTATTTGGTGTATTCAGGAGGAGCCATCCATAAGGCCTTCCATGAAGAAGGTGACCCAGATGCTAGAAGGAGCTGTTGAAGTTTCCATGCCCCCAGACCCTTCCTCCTTCATTAGCTCAATTAATTAA 2421 0.4449 MASVFTHLLCLIFLLLPPSAVSQTSDKNIPLGASLISHNESSFWLSPSGEFAFGFYRLEEDLFLLAIWFAKIENVKSIIWTAYEGKPVHRGSRIELTTEGELILRDRNNSQLWKPPMDGSQASSAAMLDTGNFVLRNESNNIWESFNFPTDTILPTQILNRGGKLLSRQTDDDYSTGKFKLELQLDGNLVMYITAQLTGDNYAHYWSSDTVGFGSQLIFNQSGDIYLTVPNRTKDFYMTEKMPVSTRDFYQRATFDFDGVFRQYNFPKTSNDGRWSSQSWSVAWYKPPNICTAIVSGVGGGTCGYNSYCRLDDKLRPKCECPPEYVPSDPKNAFKGCKQNFLPLSCETDIGLMAAGGFEMREIPNTDWPGSDYRSYKAMDEDKCRKFCLDDCFCVGAVIGAGDCWLKFFPLQNGRMDPGNEFKALIKVRNSSSLTVPHPDFGGNKKDKEDNDKLILLGSIFLGSSVFLNFLLFLAISLAVFYILCQKKLFKIRPEPSTFEMNLRSFTYKELEEATDCFKEELGKGAFSTVYKGVLRLGNRSLVAVKKLNNGVQEIDNEFIAEVSAIGGTNHKNLVQLLGFCDEGSHRLLVYEFMRNGSLASFLFGNSRPDWYRRIQIAFGIARGLTYLHEECSTHVIHCDVKPQNILIDDSLEARISDFGLAKLLKTDQSRTSTGIRGTRGYVAPEWFKNMAITAKVDVYSFGIVLLEIICCRRNVEFGLEDEEKAILSDWAYDCFRGGKLHLLVGNDEEAMNDSRRLEKWVMVAIWCIQEEPSIRPSMKKVTQMLEGAVEVSMPPDPSSFISSIN* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01121 806 SUPERFAMILY Protein kinase-like (PK-like) 497 787 IPR011009 -
Eupl08g01121 806 Gene3D - 149 294 - -
Eupl08g01121 806 Gene3D Phosphorylase Kinase; domain 1 484 593 - -
Eupl08g01121 806 Pfam D-mannose binding lectin 78 159 IPR001480 -
Eupl08g01121 806 ProSiteProfiles Protein kinase domain profile. 516 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01121 806 PIRSF SRK 1 806 IPR024171 GO:0004674
Eupl08g01121 806 FunFam S-receptor-like serine/threonine-protein kinase 487 593 - -
Eupl08g01121 806 ProSiteProfiles Bulb-type lectin domain profile. 20 148 IPR001480 -
Eupl08g01121 806 Gene3D - 24 147 IPR036426 -
Eupl08g01121 806 Gene3D Transferase(Phosphotransferase) domain 1 594 799 - -
Eupl08g01121 806 ProSitePatterns Protein kinases ATP-binding region signature. 522 547 IPR017441 GO:0005524
Eupl08g01121 806 CDD STKc_IRAK 522 788 - -
Eupl08g01121 806 FunFam Serine/threonine-protein kinase 150 294 - -
Eupl08g01121 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 798 - -
Eupl08g01121 806 Pfam Protein kinase domain 519 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01121 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 794 - -
Eupl08g01121 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Eupl08g01121 806 SMART blect_4 33 149 IPR001480 -
Eupl08g01121 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 147 - -
Eupl08g01121 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 210 IPR036426 -
Eupl08g01121 806 SMART serkin_6 516 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01121 806 CDD PAN_AP_plant 343 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01121 Eupl-Chr8 30893384 30942079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01121 495 804 Receptor kinase-like Gene Family AT1G60800 41.515 7.95e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl08g01121 Pkinase 6.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01121 - - msin:131219961 918.687