Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01114 ATGGAAAGCAAGGATAAACCTCAGAAGGATTATTACAAAGTGTTGGAGGTTGATTATGACGCAACAGATGAGAAAATCAGATTAAATTATCGAAGACTTGCACTGAAGTGGCATCCCGACAAACATAAGGGTGACAATGCTGTCACTGCAAAGTTCCAAGAGATTAATGAAGCTTACAAAGTTTTGAGTGATCCAGCTACACGATTTGATTATGATCTAACTGGAGCTTATGAGATTGATAAATACACATTGCGAGAATATCTAACCAGATTCAAGGGAATGATACTTACCTGCAATGGACTTGGTATTGATCATGCTTCATTATGGGCACAGCAGCTGATGGAAACTAATGAGTGTGTGGATAAATAA 369 0.3794 MESKDKPQKDYYKVLEVDYDATDEKIRLNYRRLALKWHPDKHKGDNAVTAKFQEINEAYKVLSDPATRFDYDLTGAYEIDKYTLREYLTRFKGMILTCNGLGIDHASLWAQQLMETNECVDK* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01114 122 ProSiteProfiles dnaJ domain profile. 10 75 IPR001623 -
Eupl08g01114 122 SMART dnaj_3 9 67 IPR001623 -
Eupl08g01114 122 CDD DnaJ 10 64 IPR001623 -
Eupl08g01114 122 Pfam DnaJ domain 10 72 IPR001623 -
Eupl08g01114 122 Gene3D DnaJ domain 1 89 IPR036869 -
Eupl08g01114 122 PRINTS DnaJ domain signature 12 30 IPR001623 -
Eupl08g01114 122 PRINTS DnaJ domain signature 30 45 IPR001623 -
Eupl08g01114 122 PRINTS DnaJ domain signature 47 67 IPR001623 -
Eupl08g01114 122 FunFam Chaperone protein DNAj, putative 2 89 - -
Eupl08g01114 122 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 107 - -
Eupl08g01114 122 SUPERFAMILY Chaperone J-domain 8 97 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01114 Eupl-Chr8 30740690 30750055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01114 11 72 C2H2 Transcription Factor Family AT1G74250 44.776 7.85e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01114 - - ming:122058186 220.705