Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01102 ATGTCGACGAGCAGCTTACAAGTTATAACTTGTAAAGCGGCGGTATGTTGGGGACTTGGGGAGCCTATGAAGATGGAAGAGATCCAAGTTGAGCCACCGCAATCATCGGAAGTTCGCGTTAAGATGCTTCGCGCAAGCCTTTGCCACACAGATATCCTGTGTTGGAAAGGATATCCTCTTCCATTGTTCCCTAGAGTTTTAGGACATGAAGGTGTTGGTGTTGTAGAGAGCGTTGGCGAATTGGTGACAGAGGTGAAAGAAGGGGACCTTGTTATCCCAGCCTACATAGGAAACTGCGATGAATGTGAGAACTGTACTTCGGGAAAGACCAATATATGCCCGATATTCCCTATCCAACTTCATGGTCTCATGCCCGATGACACTTCCAGAATGTCCGTTAAAGGCCAAAAGCTCTACCATGTATTTAGTTGCTCAACATGGTCCGAATACACGGTTATGAACGTTAACTACGTCGTGAAGATCGATTCGAGATTGGCTCTAAATCATGCCAGCCTTCTGTCCTGTGGGTTCTCAACTGGATTTGGGGCAACATGGAAGGAAGCTAAAGTCGAAAAGGGATCCACTGTTGCTGTTTTGGGTCTCGGAGGTGTTGGATTAGGGGTGGTAGAGGGCGCTCGAATGAGGGGAGCAAGTAGAATAATCGGCGTAGATTTAAATGAGAGGAAGATGGAGAAAGGAAAGGTGTTTGGAATGACGGATTTCATAAACACCATGGAATCCGATAAGTCTATTTCGGAGATGATTAAAGAGATGACAGGAGGGTCAGGTGTGGACTACATCTTCGAGTGCACTGGGGTTGCACCCTTGATCAATGAAGCTGTCGAAGCGACGATACCGGGAAAAGGGGTAACGATATTAATCGGGGCAGGCGAACAAAGCGTTTCGCTCAGTCTTCTCTCCCTGATGTTTGGTAGGACATTGAAGGGTTCCATCTTCGGAGGGATCAAACCTCACTCTGACCTTCCCGTGATTGTCGAAAAATGCGTAAACAAGGAAATCCAACTTGATGCACTTGTGACTCATGAAGTTCAACTAGATGACATAAACCGAGCCTTTGAGCTAATGAAGCAACCAGACTGTCTCAAAGTTGTAATACAGATGAACAAGACCTGA 1134 0.4638 MSTSSLQVITCKAAVCWGLGEPMKMEEIQVEPPQSSEVRVKMLRASLCHTDILCWKGYPLPLFPRVLGHEGVGVVESVGELVTEVKEGDLVIPAYIGNCDECENCTSGKTNICPIFPIQLHGLMPDDTSRMSVKGQKLYHVFSCSTWSEYTVMNVNYVVKIDSRLALNHASLLSCGFSTGFGATWKEAKVEKGSTVAVLGLGGVGLGVVEGARMRGASRIIGVDLNERKMEKGKVFGMTDFINTMESDKSISEMIKEMTGGSGVDYIFECTGVAPLINEAVEATIPGKGVTILIGAGEQSVSLSLLSLMFGRTLKGSIFGGIKPHSDLPVIVEKCVNKEIQLDALVTHEVQLDDINRAFELMKQPDCLKVVIQMNKT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01102 377 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Eupl08g01102 377 SUPERFAMILY GroES-like 7 191 IPR011032 -
Eupl08g01102 377 FunFam Alcohol dehydrogenase 6 14 193 - -
Eupl08g01102 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 167 336 IPR036291 -
Eupl08g01102 377 Pfam Zinc-binding dehydrogenase 203 321 IPR013149 -
Eupl08g01102 377 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 317 - -
Eupl08g01102 377 CDD liver_alcohol_DH_like 9 372 - -
Eupl08g01102 377 Gene3D - 14 369 - -
Eupl08g01102 377 Gene3D - 180 317 - -
Eupl08g01102 377 SUPERFAMILY GroES-like 325 372 IPR011032 -
Eupl08g01102 377 SMART PKS_ER_names_mod 18 372 IPR020843 GO:0016491
Eupl08g01102 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Eupl08g01102 377 PANTHER ALCOHOL DEHYDROGENASE 7 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01102 Eupl-Chr8 30503574 30508085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01102 36 366 Monolignol Biosynthesis Gene Families AT2G21730 26.453 2.29e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01102 K00121 - ming:122085401 531.176