Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01081 ATGGCTGGGTTGGATTTAGGCACCGCTTCTCGTTTTGTTCATCAGCTCCATAGGGCAGAATTGCACCTCCAAAGGCAATCGGAATCTGACGATGACAACAATCGAGGTCAGTATTCCGGTGACCATGATGACAGCGGTCATCAAGGACTTGAGCTTGTCGCCGCTAACTCCGGACATGGTGACATCGTTGGTCGCCGACCAAGAGGTCGACCCCCCGGTTCAAAGAACAAGCCGAAGCCACCGGTAATTATAACAAGGGAGAGCGCCAACACGCTTCGGGCGCACATTTTAGAAGTAGGGAACGGCTGCGATGTCTTTGACTGCGTAGCGACGTACGCGCGCCGGCGGCAACGAGGGATCTGTATCTTGAGTGGGAGCGGCACGGTGACTAACGTGAGCCTGCGGCAGCCGGCAGCTGCTGGCGCGATCGTGACGCTGCACGGACGGTTTGAGATATTATCGCTATCTGGATCGTTTTTGCCGCCACCAGCGCCACCGGGTGCGACAAGCCTGACAATATTTTTGGCGGGAGGGCAGGGTCAGGTCGTGGGGGGAAGTGTTGTTGGTGCGTTGATCGCTGCGGGCCCGGTAATCGTGATTGCTGCGTCGTTCACGAATGTAGCGTACGAGCGGCTGCCGTTGGAAGAAGAGGAGCCACTTCAGATACAACCACCGGTCTCTCAATCTTCTGGTGGTGGAGGTGGTGGTGGTGGTGGTGGAATTAACAACCCGTTTCCAGACCCATCTTCGGCTCTTCCATTCTTCAATTTGCCGCTCAATATGGGTAATTGTCAGTTACCTGTTGACGGTTGGGCGGGTAACGCAGCTGGCCGGTCTCCATACTGA 846 0.5603 MAGLDLGTASRFVHQLHRAELHLQRQSESDDDNNRGQYSGDHDDSGHQGLELVAANSGHGDIVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGICILSGSGTVTNVSLRQPAAAGAIVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGALIAAGPVIVIAASFTNVAYERLPLEEEEPLQIQPPVSQSSGGGGGGGGGGINNPFPDPSSALPFFNLPLNMGNCQLPVDGWAGNAAGRSPY* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01081 281 ProSiteProfiles PPC domain profile profile. 89 225 IPR005175 -
Eupl08g01081 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 223 - -
Eupl08g01081 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 231 IPR014476 GO:0003680
Eupl08g01081 281 CDD DUF296 93 176 IPR005175 -
Eupl08g01081 281 MobiDBLite consensus disorder prediction 23 48 - -
Eupl08g01081 281 MobiDBLite consensus disorder prediction 218 243 - -
Eupl08g01081 281 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Eupl08g01081 281 Gene3D - 92 225 - -
Eupl08g01081 281 MobiDBLite consensus disorder prediction 23 82 - -
Eupl08g01081 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01081 Eupl-Chr8 29821415 29822583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01081 1 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 68.317 1.44e-108 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01081 - - nnu:104610369 471.855