Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01059 ATGGTGCAGGTGCAGGTGCAAGTGCGCAGAGCCAACTCGTCTGTTCAGGCTGTCGAAACCTCCTTCTCTATCCCGTTGGAGCAACCTCAGTATGTTGTGCTGTTTGCAATGCAGTTACAGCTGTGCCACCCCCTGGTACAGTTCTTCTACAATATATTTGTTTATATTACTCTGCATATTGTATCAATGGAGTTATCTGAAGGCACTGAAATGGCTCAGCTGGTATGTGGAGGTTGCCACACCTTATTGATGTACATTCGTGGAGCAACAAGTGTACAATGCTCTTGTTGCCATACGGTCAACCTGGCCTTGGAAGCGAATCAGGTTGCACATGTCAATTGTGGGAACTGCCGGATGCTGTTGATGTACCAATATGGAGCACGATCTGTGAAATGTGCGGTTTGCAGTTTTGTGACATCAGTTGGGGCATCACCAAGCACTACTGAACAGAAGTACAATAATTGA 465 0.4645 MVQVQVQVRRANSSVQAVETSFSIPLEQPQYVVLFAMQLQLCHPLVQFFYNIFVYITLHIVSMELSEGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTTEQKYNN* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01059 154 NCBIfam zinc finger domain, LSD1 subclass 111 140 IPR005735 -
Eupl08g01059 154 NCBIfam zinc finger domain, LSD1 subclass 73 102 IPR005735 -
Eupl08g01059 154 SUPERFAMILY Multiheme cytochromes 69 118 IPR036280 -
Eupl08g01059 154 PANTHER PROTEIN LSD1 65 143 IPR040319 -
Eupl08g01059 154 Pfam LSD1 zinc finger 114 138 IPR005735 -
Eupl08g01059 154 Pfam LSD1 zinc finger 76 100 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Eupl08g01059 zf-LSD1 1.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01059 - - ming:122060406 182.956