Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01051 ATGGGAGGAGCATCGTTGCCGCCTGGTTTTCGGTTCCACCCGACGGATGAGGAATTGGTGGGCTATTACTTAAAGAGGAAAGTAGATGGACAGAAGATTGAACTTGAAGTGATCCCAGTGATCGATCTATATAAGTTTGATCCATGGGAGTTACCAGATAAGTCGTTCCTTCCGAAACGAGACATGGAGTGGTTCTTCTTCTGTCCCAGGGATCGAAAGTACCCGAATGGGTCACGAACAAATAGAGCCACAGGAGCTGGCTATTGGAAAGCCACTGGAAAAGACCGGAAAATAGTCTGTCAGTCCAATGTGATCGGGTTTAGGAAGACCCTGGTCTTTTATCGTGGACGGGCCCCTTTAGGAGATCGAACAGACTGGGTGATGCATGAATATCGACTCTATGATGATCTTTCTCAAGGATCAACTGGTTTTCAGGGAGCTTTTGCTTTGTGTCGTGTAGTTAAGAAGAACGAACAGGGACTGAAGACAGGTGATCTCCAAGGAGAATCAAAATCCAAGAGAGTGGGAAGCTCTTCTTCCACTGGGCAATTCACCCCACCAATTTTCTCAAGTGAACTCTTAAATACTTCCAATGAGAGCCCCTCTCAAGCTACTAACCTATACAATGGGAGTAATTATTCAAGCCCTGCCAGTTCCCCCTATGCAAGTACCAGGATGAGGGAGATCGATCCAACTTTGACTGAAATCCATCTTGGGAACCTTTCAGTCTCTCCTGATCTAATTCTGGATACCTCAAAGGTTTGCCCACAGGGACAAGATGTTGCATCTGAATGTTTACCAAGCCACAAGTTTTCAAACTCAATAACTTCATGGCAACCATCTGATTCAACAGAATTCTTTCCCACTTCATCCTACACAAACTATATAGATGGGGTTGATCTAGCTAATGATTTCGGTCAAATCAGCTGTATGTCACCTTATATGGGACCTACAAACTACATGGGCTTGTGGGGAGATGATGCTATGACATATGAAAGCCTCGAATGTACTGATTCACTGAGAAATATGAACCCATCGATGAATGGGTTCGAAGCTTGGAACCCAGTGTCATCTTCTCCAATTTGCAGACAAACCAGTGGAGATGGGAGTCAGGGGGAGCTAACCAGCCTGTGGTTGCAAGACGACAACTTGGTGATTGTGATGTGA 1167 0.4524 MGGASLPPGFRFHPTDEELVGYYLKRKVDGQKIELEVIPVIDLYKFDPWELPDKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATGAGYWKATGKDRKIVCQSNVIGFRKTLVFYRGRAPLGDRTDWVMHEYRLYDDLSQGSTGFQGAFALCRVVKKNEQGLKTGDLQGESKSKRVGSSSSTGQFTPPIFSSELLNTSNESPSQATNLYNGSNYSSPASSPYASTRMREIDPTLTEIHLGNLSVSPDLILDTSKVCPQGQDVASECLPSHKFSNSITSWQPSDSTEFFPTSSYTNYIDGVDLANDFGQISCMSPYMGPTNYMGLWGDDAMTYESLECTDSLRNMNPSMNGFEAWNPVSSSPICRQTSGDGSQGELTSLWLQDDNLVIVM* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01051 388 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Eupl08g01051 388 MobiDBLite consensus disorder prediction 163 222 - -
Eupl08g01051 388 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Eupl08g01051 388 FunFam Nac domain-containing protein 86 15 159 - -
Eupl08g01051 388 MobiDBLite consensus disorder prediction 162 223 - -
Eupl08g01051 388 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 214 - -
Eupl08g01051 388 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Eupl08g01051 388 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01051 Eupl-Chr8 29227365 29230457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01051 1 300 NAC Transcription Factor Family AT4G17980 52.941 5.52e-101 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl08g01051 NAM 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01051 - - ming:122081259 532.332