Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01044 ATGGGCTGCTGTCAGTCCAAAACCAGCAACGTTCAATCTCCCGATGAAGAATCCTTACAAGCTGAGAAACCAGATCTAGCTAGCGGAGATCAGGTGGACCAAGATCAAGTTCCTGCATTCAAGGAGTACGGTTTGTCGGAGCTCCGAACTGCGACGAACGGGTTCAGTTCTGATTACATCGTTTCGGAGAGTGGAGAGAAAGCTCCGAATGTCGTTTACAGAGGGAAGCTTGAGAACAATCGGTTAGTCGCCGTTAAACGCTTCTCCAAACTGTCCTGGCCCGATGCGCAGCAGTTCGTGGCGGAAGCAGCCGGAGTCGGAAAAGTACGGCACAAGAGATTGGTGAATCTGATCGGGTGCTGCGCCGAGGGAGATGAACGGCTCTTGGTAGCTGAGTACATGCCAAATGATACTCTGTCGAAGCATCTCTTCCACTGGGACAAGCAGCCATTGCCATGGGAAATGCGTTTGAGGGTTGCGTACTATATTGCACAGGCACTTGATCATTGCAATACTGAAAATCGGAGAATTTATCATGATTTGAATGCATACAGAGTTCTTTTTGACGAGGATGGTGACCCTCGTTTATCTAGTCTCGGCCTAATGAAAAATAGTCGGGATGGGAAAAGCTATAGTACAAACCTTGCTTATACTCCGCCAGAGTTTTTGCGGACAGGCAGGGTCATCCCAGAGAGCGTGATCTACAGTTATGGAACAGTTTTGTTGGACCTTTTGAGTGGGAAGCATATTCCTCCTAGCCATGCCTTAGACTTGATAAGGGGAAAGAATGTATTGCTGCTGATGGATTCATCCTTGGAGGGGCAGTATGCTAATGAAGATGCTACCAAGTTGGTTGAGCTGGCCTCAAGATGTCTTCAGTCTGAGGCTAGAGATCGGCCCAATACTAAGTTTCTTCTTACAGCTGTAGCGCCCCTTCAAACGCAGAGAGAGGTGGCATCAAATGTTCTAATGGGTCTACCAAAAACTACAACTGTGCTGCCTACAATGCTTTCTCCGCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTGTGCATGACATCTTGCTTAAAACAGGTTATAAGGATGAAGAGGGTGCAGAAAATGAGCTTTCATTTCAAGAATGGACGCAACAGGTGCAAGAGATGTTGAATACAAAGAAATTTGGAGATATCGCGTTTAGGGACAAGGACTTCAAGAGTTCTACTGATTATTATTCAAAGTTGGTGGTGATGATGTCTGTTCCATCAGCTACCGTCTTCGCAAGGCGGGCCCTCTCTTACTTGATGAATGGCCAGCCAGAACTTGCCCTGAGGGATGCTATGCAGGCTCAAGTGTGCATGCCAGAGTGGCCCACTGCCTTCTACTTGCAAGCACTTGCCCTCTCGAAGCTCGGAATGGAAACTGATGCTCAGGACATGCTCAATGATGGAGCCGCTTTTGAAGCGAAGAAGCAAAACAGCTGGCGTGGTTAA 1476 0.4776 MGCCQSKTSNVQSPDEESLQAEKPDLASGDQVDQDQVPAFKEYGLSELRTATNGFSSDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFVAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRLRVAYYIAQALDHCNTENRRIYHDLNAYRVLFDEDGDPRLSSLGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANEDATKLVELASRCLQSEARDRPNTKFLLTAVAPLQTQREVASNVLMGLPKTTTVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDFKSSTDYYSKLVVMMSVPSATVFARRALSYLMNGQPELALRDAMQAQVCMPEWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKKQNSWRG* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01044 491 SUPERFAMILY Protein kinase-like (PK-like) 42 308 IPR011009 -
Eupl08g01044 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 486 IPR045845 GO:0004672|GO:0009742
Eupl08g01044 491 FunFam probable serine/threonine-protein kinase At4g35230 30 133 - -
Eupl08g01044 491 FunFam probable serine/threonine-protein kinase At4g35230 381 490 - -
Eupl08g01044 491 Gene3D Tetratricopeptide repeat domain 381 490 IPR011990 GO:0005515
Eupl08g01044 491 SUPERFAMILY TPR-like 386 480 IPR011990 GO:0005515
Eupl08g01044 491 FunFam probable serine/threonine-protein kinase At5g41260 135 326 - -
Eupl08g01044 491 MobiDBLite consensus disorder prediction 1 17 - -
Eupl08g01044 491 Gene3D Phosphorylase Kinase; domain 1 29 133 - -
Eupl08g01044 491 MobiDBLite consensus disorder prediction 1 36 - -
Eupl08g01044 491 ProSiteProfiles Protein kinase domain profile. 58 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01044 491 Gene3D Transferase(Phosphotransferase) domain 1 135 326 - -
Eupl08g01044 491 Pfam Protein tyrosine and serine/threonine kinase 71 305 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01044 Eupl-Chr8 29086577 29111602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01044 39 314 Glycoside Hydrolase AT3G07070 34.114 7.25e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Eupl08g01044 PK_Tyr_Ser-Thr 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01044 K14500 - nnu:104610398 934.865