Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01028 ATGGATTTGATTAAGATAGGTTTAATGGTATTAGTGTTGATTTTCCATGGTACTGAGGGTTCAAATTACGACCCGATTCTCGTCCCGGATTACTACAAAGATTCATGCCCATATGCAGAGGAGATTGTGAGACGTAACGTCGAGATCGCCGTGCTTAAAGATCCCCGAATGGCGGCCTCCCTCCTTCGCCTACATTTTCACGACTGCTTTGTTCTGGGATGTGATGCCTCAGTCCTTTTGGACGACAGCGCGGACATCGTAAGCGAGAAGCAGGCAGGGCCCAACATAAACTCTCTAAGAGGGTTCGATGTGATCGACAGAATAAAGGCCCTCCTCGAGAAGGCGTGTCCGGAAACAGTATCATGCGCCGATCTTCTTGCCATAGCTGCTCGTGATTCCGTTGTATTGAGAGGTGGCCCAAGTTGGACAGTTGTTTTGGGCAGGAGGGATTCTCTTAAAGCAAGCTTCAATGGTGCAAACCAGTTCATTCCTTCACCTAATTCATCACTGGAGGGTCTCGTTGTGAATTTCGCGGCCCACGGTCTCGACACCAACGACTTAGTCACTCTATCAGGTAGCCATACGATCGGAGTATCGAGATGTGTAAGCTTCAAGCAGAGGATCTACAATAACATAGAAGATGAAATGGATTATCACAGGAGAAACACAGTTTTTCGTCGCATTTTGCGGTCGATATGTCCGCAATTAGGGAGAGACAATGCTATAGTTCCGCTTGACTTCATGACTCCGGCGAAGTTCGATAACTTCTACTTCAAAAACATTCTACAAGGCAAGGGGTTGCTACAAAGTGACAATGTGCTAATTACTCAAGACGTCGAAGGATTAATATCGAAACAAGCGTGGGTTTATGCTTCTAATCAAGAACTTTTCTTTAAATCGTTCGTGAGATCGATAGTGAAGATGGGGAACATCAATGTACTCACCGGAGAGGCGGGCGAAATCCGTCGAAATTGCAGGTTCTTGAACACCTTGTAA 996 0.4608 MDLIKIGLMVLVLIFHGTEGSNYDPILVPDYYKDSCPYAEEIVRRNVEIAVLKDPRMAASLLRLHFHDCFVLGCDASVLLDDSADIVSEKQAGPNINSLRGFDVIDRIKALLEKACPETVSCADLLAIAARDSVVLRGGPSWTVVLGRRDSLKASFNGANQFIPSPNSSLEGLVVNFAAHGLDTNDLVTLSGSHTIGVSRCVSFKQRIYNNIEDEMDYHRRNTVFRRILRSICPQLGRDNAIVPLDFMTPAKFDNFYFKNILQGKGLLQSDNVLITQDVEGLISKQAWVYASNQELFFKSFVRSIVKMGNINVLTGEAGEIRRNCRFLNTL* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01028 331 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 FunFam Peroxidase 164 308 - -
Eupl08g01028 331 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 Pfam Peroxidase 43 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PANTHER PEROXIDASE 72-RELATED 27 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 FunFam Peroxidase 30 172 - -
Eupl08g01028 331 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Eupl08g01028 331 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Eupl08g01028 331 Gene3D Peroxidase, domain 2 164 309 - -
Eupl08g01028 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl08g01028 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Eupl08g01028 331 Gene3D - 31 329 - -
Eupl08g01028 331 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01028 Eupl-Chr8 28799229 28820232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01028 20 329 Peroxidase AT1G44970 57.742 3.71e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01028 K00430 - ming:122087633 471.47