Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01022 ATGCAGACATGTTTGATTCAGAGAGTGTATCAAGTGGGGTCGTTTCATGATATGAACGATGTCAAGAAGGATAATGGGGAGCATAGGGATAAATCAATTTATAATCCAGATTTCAAACTTCTACAGTATTGGAAAGCACTATTGCAATTAAGCTCACCATGTTTCTGGGAGGAAGTTGGCATAGTTCTCCAACTCGGGATCCTCGGAAGCATATTAGTTCATTTCATACAGAAAAGAGCATGCCTATCATGCACACAGAGATCAAAAATTACAGAGAATGGGGCAGAAAAGAATCACATCACTGTAACACTTGGCCTCTCTTACAAAGCCAGTATAGGTTGCTCGACTTTACTATTGATCAGCCATTTCCTGATGCTTCTGATGCTGCTGAATGGGAAGGAGGCCCTTTGCAAATCCACAGTCTCAGTTCTTTCGGAAGAAATCTTGCAAGTAATATTGTGGTTGGTCACGTTGATTGAATTTTTTAATCTTCAGAAATCGAGGTCCACAGGGCTTCCTTGGATTTTAAGAACCTGGTGGATGTGCAACTTCTTACTGTCCATTATCCACACAGCTCTTGATACCCATTACATTCTTACAAGCCATAGGTCCCCCAGAGCGGGAGATTATGCCGACTTCCTCAGCTTCCTCGCCTCCACCTACCTGCTGTGTATTTCGATCAAAGGGACCACAGGCATTAGCTTCCTCGCCAGTGGCATCACAGATCCACTTCTCAATAACAAAACTGAAAAGCAAACAGAAGGCAAAAGGGAATCGCCATATGGAAAAGCTACTCTTCTCCAACTCATCACCTTCTCTTGGCTCAACCCATTGTTCACAGTAGGGATCAAGAAACCACTCGAACAGGATGAAGTCCCAGATGTCTATATCAAAGACTCCGCTGGATTTCTTTATCATTCATTTGAAGACAGTCTGAATCTTGTCAAGGAGAGAGACGGCACCACAAATCCATCCATCTACAAGGCAATCTTTCTGTTTATCAGGAAGAAAGCAGCAATCAATGGATTGTTTGCAGTGATTAGTGCTGGAGCATCGTATGTTGGCCCATATCTGATCAACGACTTTGTGAAGTTTCTAAGTGGGAAGAAGCAGCATAGCTTAGAGAGTGGGTACCTTCTTGCACTAGCCTTCTTAAGTGCCAAAATGGTTGAAGTGGTTGCACAGAGGCAATGGATCTTTGGGGCCCGCCAGCTGGGTCTTCGCCTACGAGCGGCTCTGATATCCCACATATACAAGAAGGGTCTCCATCTATCGAACCAGTCCCGACAAAACCGTAGTAGTGGAGAGATCATTAACTACATGAGTGTGGATATCCAACGTATCACAGACTTCATCTGGTATTTGAACACAATATTTATGTTACCAATACAAATTTCCCTAGCAATCTACATTCTAAGTATGAATCTGGGTCTTGGTTCATTGGCGGGATTAGCAGCGACCGCGATGGTGATGGCTTGCAACATACCCATTACAAGGATCCAGAAAAGGTTCCAGTCCAAGATCATGGAAGCCAAGGACAACAGGATGAAAGCCACGTCAGAGGTTCTCCGAAACATGAAGACTCTAAAACTTCAAGCATGGGATGTTCAGTACCTCCACAAGCTTGAAAGCTTAAGAAAAACTGAGTACAATTGGTTATGGAAGTCACTAAGGTTATCAGCAATCTCAGCTTTTATCTTCTGGGGATCTCCCACATTCATCTCTGTGGTGACATTTGGGGCATGTATTCTAATGGGGATCCCACTCATGGCTGGGAGTGTCTTATCTGCATTGGCAACTTTCCAAATGTTACAAGATCCGATCTTCAATCTACCTGACTTACTGTCAGTGATTGCACAGGCTAAAGTTTCAATGGATCGAGTTGCGTCATACCTCCAAGAAGATGAAATTCAGTCGGACTCTGTCACGTTTGTTCCGAAAGATGAATCGGAGTTCGAGATCGAGATTGACACTGGGAAATTCAGTTGGGACCCAGAATCAAGAAACCCGACTCTTGACAGAATACAATTAAAAGTGAAGAGGGGGATGAAAGTGGCAGTTTGTGGGACTGTCGGATCAGGGAAGTCTAGTCTGCTCTCATGCATACTTGGAGAAATACCGAAGCTTTCAGGGACAGTGAAGATTAGTGGGACGAAGGCTTACGTTCCTCAATCCCCATGGATACTAACAGGAGATGTCAGAGAGAATATTCTCTTTGGGAATCCCTATGACAGTGCCAAGTATGACAGAACTGTTACAGCATGTGCTTTGACAAAGGATTTTGAGCTCTTCTCGTGTGGTGACCTAACGGAGATTGGAGAAAGAGGGATTAATATGAGTGGAGGCCAAAAGCAAAGGATACAAATCGCACGTGCGGTCTACCAGGACGCTGATATATATCTTCTCGATGACCCTTTCAGTGCCGTGGATGCTCATACAGGCACCCAACTCTTTGAGGATTGCCTGATGGGAATTCTCAAAGATAAGACGATACTTTATGTTACCCACCAAGTCGAGTTTCTTCCGGCAGCTGACCTCATTCTGGTGATGCAAAATGGAAGAATTGCACAGGCTGGAAGGTTTGAAGAACTTCTAAAACAGAATATAGGATTCGAAGTGTTAGTTGGTGCACATAGCCAAGCTCTAGAATCTATCCTCACGGTCGAAAACTCAAGTAGAACATGTCAAAGACCTAAATCCGATAGCGAAGCTGACACAGACCTGATAACAAATCCACAGCTTCTAAATGGTAAGCATGACTCCAAACAGAATCTCTCCTTGGAGATAACGGACAAAGGAGGGAGATTGACGCAAGACGAAGAGAGAGAGAAAGGAAGCATTGGAAAAGAAGTTTACTGGTCTTACTTGACAGCGGTTCGGGGAGGGGTTTTGGTCCCAATCATACTCCTGGCACAGTCACTCTTCCAAGTATTACAGATAGCCAGTAACTATTGGATGGCATGGGCTTGTGCTCCTACAATGGAGACCGAGCCACTAATAGGGATGAATGTCCTTTTCCTTGTGTATATACTTCTCTCCGTTGGAAGTTCACTTTGTGTGTTGGTCCGTGCAATGCTAGTAGCAACAGCTGGACTTCTGACATCACAGAAGTTCTTCACAAGCATGCTGCATAGTGTGCTCCGGGCTCCAATGTCTTTCTTTGATTCAACCCCAACCGGAAGGATCTTAAATCGGGCATCTACAGACCAAAGTGTGATAGACTTGGAAATGGCTAACAAATTAGGCTGGTGCGCTTTCTCAATAATACGAATTCTGGGGACCATTGCAGTCATGTCCCAGGTTGCATGGCAACTATTTGCCATCTTCATTCCGGTGACTGCAATCTGCATATGGTATCAACAATACTATGTACCCACTCAAAGAGAACTGGCCCGTTTAGATGGAATTCAAAGAGCTCCAATCCTCCATCACTTTGCAGAATCACTTTCGGGAGCTGCAACAATCCGGGCTTTCGACCAAGAAGATCGCTTCATTAATGCGAACCTAGGCCTTATTGATAACCACTCAAGGCCATGGTTCCATAGTGTGTCAGCTATGGAATGGCTTTCCTTCAGACTGAACCTACTGTCCAATTTTGTGTTTGCATTCTCATTGGTTTTGCTTGTGAGCCTTCCCGAAGGAATTATCAACCCAAGCATTGCAGGGTTGGCAGTGACATATGGGCTGAGTCTGAATGTACAGCAAGCTTCTGTTATATGGAACATATGCAACGCCGAGAATAAAATGATCTCAGTAGAAAGGATTTTGCAATATTCGAAAATTACTAGTGAAGCCCCTTTGGTGATTGAAGAAAGTAGGCCGCCAAACAACTGGCCAGAAATTGGAAGCATTTGCTTCAAAAACTTGCAGATCCGCTATGCTGAGCATCTTCCGTCTGTCTTAAAAAGCATTAACTGCACATTTCCTGGAAGGAAGAAGGTTGGTGTTGTAGGACGGACAGGAGGCGGGAAATCAACTCTCATACAGGCTATCTTCCGGATTGTGGAACCCAGAGAAGGAAGCATTGTAATTGATGATGTGGATATTTGCCAGATAGGCCTTCATGACTTGAGATCCAGACTTAGCATCATTCCACAGGACCCGACATTGTTTGAGGGAACAGTGAGAGGAAACCTCGACCCATTAGAGCAATACTCCGACAATGAAATATGGGAGGCTTTGGATAAATGTCAACTCGGTGATCTAGTACGTGCTAAGGAAGAGAAGTTGGATTCAACAGTGGTTGAGAATGGAGAAAACTGGAGTGTGGGACAGAGGCAGCTGTTCTGTCTTGGAAGAGCCTTGTTAAAGAGAAGCAGCATTCTTGTTCTGGATGAAGCTACTGCCTCTGTTGATTCAGCAACTGACGGCGTGATACAGAAGATCATTAATCAGGAGTTCAAAGATCGCACTGTTGTCACCATAGCTCACAGAATCCACACAGTTATAGATAGTGATCTCATTCTGGTCCTTAGTGAAGGAAGGATAGCAGAGTTCGACACACCAACTAATCTACTGGAAAGAGAGGATTCATTCTTCTCAAAGCTTATAAAGGAGTACTCTTTGAGATCACAGAGCTTCAACAGCTTAGCGAACTTACAAGATGCAGATCCCATCTCTTAG 4623 0.4424 MQTCLIQRVYQVGSFHDMNDVKKDNGEHRDKSIYNPDFKLLQYWKALLQLSSPCFWEEVGIVLQLGILGSILVHFIQKRACLSCTQRSKITENGAEKNHITVTLGLSYKASIGCSTLLLISHFLMLLMLLNGKEALCKSTVSVLSEEILQVILWLVTLIEFFNLQKSRSTGLPWILRTWWMCNFLLSIIHTALDTHYILTSHRSPRAGDYADFLSFLASTYLLCISIKGTTGISFLASGITDPLLNNKTEKQTEGKRESPYGKATLLQLITFSWLNPLFTVGIKKPLEQDEVPDVYIKDSAGFLYHSFEDSLNLVKERDGTTNPSIYKAIFLFIRKKAAINGLFAVISAGASYVGPYLINDFVKFLSGKKQHSLESGYLLALAFLSAKMVEVVAQRQWIFGARQLGLRLRAALISHIYKKGLHLSNQSRQNRSSGEIINYMSVDIQRITDFIWYLNTIFMLPIQISLAIYILSMNLGLGSLAGLAATAMVMACNIPITRIQKRFQSKIMEAKDNRMKATSEVLRNMKTLKLQAWDVQYLHKLESLRKTEYNWLWKSLRLSAISAFIFWGSPTFISVVTFGACILMGIPLMAGSVLSALATFQMLQDPIFNLPDLLSVIAQAKVSMDRVASYLQEDEIQSDSVTFVPKDESEFEIEIDTGKFSWDPESRNPTLDRIQLKVKRGMKVAVCGTVGSGKSSLLSCILGEIPKLSGTVKISGTKAYVPQSPWILTGDVRENILFGNPYDSAKYDRTVTACALTKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFEDCLMGILKDKTILYVTHQVEFLPAADLILVMQNGRIAQAGRFEELLKQNIGFEVLVGAHSQALESILTVENSSRTCQRPKSDSEADTDLITNPQLLNGKHDSKQNLSLEITDKGGRLTQDEEREKGSIGKEVYWSYLTAVRGGVLVPIILLAQSLFQVLQIASNYWMAWACAPTMETEPLIGMNVLFLVYILLSVGSSLCVLVRAMLVATAGLLTSQKFFTSMLHSVLRAPMSFFDSTPTGRILNRASTDQSVIDLEMANKLGWCAFSIIRILGTIAVMSQVAWQLFAIFIPVTAICIWYQQYYVPTQRELARLDGIQRAPILHHFAESLSGAATIRAFDQEDRFINANLGLIDNHSRPWFHSVSAMEWLSFRLNLLSNFVFAFSLVLLVSLPEGIINPSIAGLAVTYGLSLNVQQASVIWNICNAENKMISVERILQYSKITSEAPLVIEESRPPNNWPEIGSICFKNLQIRYAEHLPSVLKSINCTFPGRKKVGVVGRTGGGKSTLIQAIFRIVEPREGSIVIDDVDICQIGLHDLRSRLSIIPQDPTLFEGTVRGNLDPLEQYSDNEIWEALDKCQLGDLVRAKEEKLDSTVVENGENWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIDSDLILVLSEGRIAEFDTPTNLLEREDSFFSKLIKEYSLRSQSFNSLANLQDADPIS* 1541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01022 1540 SUPERFAMILY ABC transporter transmembrane region 964 1266 IPR036640 GO:0005524|GO:0016020
Eupl08g01022 1540 FunFam ABC transporter C family member 5 929 1265 - -
Eupl08g01022 1540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1514 IPR027417 -
Eupl08g01022 1540 Gene3D - 1267 1520 IPR027417 -
Eupl08g01022 1540 Gene3D ABC transporter type 1, transmembrane domain 314 639 IPR036640 GO:0005524|GO:0016020
Eupl08g01022 1540 Gene3D - 649 880 IPR027417 -
Eupl08g01022 1540 FunFam ABC transporter C family member 3 1267 1519 - -
Eupl08g01022 1540 CDD ABC_6TM_ABCC_D2 965 1259 IPR044726 GO:0140359
Eupl08g01022 1540 ProSitePatterns ABC transporters family signature. 779 793 IPR017871 GO:0005524|GO:0016887
Eupl08g01022 1540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 650 870 IPR027417 -
Eupl08g01022 1540 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 877 IPR003439 GO:0005524
Eupl08g01022 1540 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 967 1247 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl08g01022 1540 FunFam ABC transporter C family member 5 639 886 - -
Eupl08g01022 1540 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1286 1518 IPR003439 GO:0005524
Eupl08g01022 1540 Gene3D ABC transporter type 1, transmembrane domain 931 1265 IPR036640 GO:0005524|GO:0016020
Eupl08g01022 1540 Pfam ABC transporter 1301 1449 IPR003439 GO:0005524
Eupl08g01022 1540 FunFam ABC transporter C family member 10 322 636 - -
Eupl08g01022 1540 CDD ABCC_MRP_domain2 1282 1502 - -
Eupl08g01022 1540 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 263 1520 - -
Eupl08g01022 1540 Pfam ABC transporter 672 806 IPR003439 GO:0005524
Eupl08g01022 1540 CDD ABCC_MRP_domain1 654 854 - -
Eupl08g01022 1540 CDD ABC_6TM_ABCC_D1 340 628 IPR044746 GO:0140359
Eupl08g01022 1540 Pfam ABC transporter transmembrane region 1000 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl08g01022 1540 Pfam ABC transporter transmembrane region 340 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl08g01022 1540 SUPERFAMILY ABC transporter transmembrane region 334 636 IPR036640 GO:0005524|GO:0016020
Eupl08g01022 1540 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 343 620 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl08g01022 1540 SMART AAA_5 1310 1503 IPR003593 GO:0016887
Eupl08g01022 1540 SMART AAA_5 681 854 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01022 Eupl-Chr8 28693414 28705544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01022 637 900 Calmodulin-binding Proteins AT2G36910 28.929 1.09e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01022 - - tss:122661860 2414.8