Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00980 ATGGCTGCTCAGGTCTCAGTTGTACACGAAGACGATTACTCGTTGCTGAAAGATCTTAAATTGGAAATCGACAGAGAAGAACCCACATTCTCTCTATGCCTTTGGATTTACCTTTTGAGCTCTATTCGCTCTCCTGCTACGATCATTCGACAGATGCACTCTGATATTGAAGGTGATGCTCCTTTCCTTGTCTTGAACAAGGAGAAGAAAATGATGCTCTTGCCACTGTTGTTTCTACATGAAGATGCTCCCCGTCCTGGCAATCATTCATGGACTGAAGTTCCGTGCGCATCAGCGGAGATCGGGTGTCCATTGGAAAAATGGGTTCATGTTGCATGCGAGGTATCTAAAAATGTTGTGCGCCTTCACATTGATGGGGTGTTGGTGGGAGAAAAGTCTCTATCGTCATCCTTGAAGAATGAATCTGATCTGGATGATTTGAGGATAACTTTGGCCGGTACTGATGGAGATAATGGAAGACTGCAGGGTTATGTCCATTATGCTCGAATCTTGCCTCTGACATCTATTAATGATCACTTTGTTAAGAACCCACCAGTAGAATTATCTATTGATAGTTCATGCGCCTCTGAGATTGAAGAAGGCGGAGATGGTGTTTGGAGCATTGTTGGTGGCAAGGCATCTTGTCGCAGGAATTTTAACTTGGACGTTGTTTTGTTAGATGCCTTTGGCCATCCTGTAAACAAGGAAATGGAGGTTGTTGCGTCGCTTATATATGCTGACAACGGAACGTCTGTTGAGAAGCCGAATGATGCAGAAGCTCCCCTTTTGACAAGCTATGATGGAATTGAATTTGCCTCTTCTGAAAGACCAAGCAAACTACTACATGGCCGCGCATCCTTTAAGCTCAAAATATCTCAGCTTTCCTCCAAATGTGACAATAGGCTGTTCCATGTTCGGTTTGACTCGCCCAAAACTGGAAGATATCCTTTTCTCGAGGCATGCTCCCGTCCAATTCGCTGTATCTCAAGGAACCGTAATACCCGGGCATCCACTCTTCAGTGGAAGAAGTCAACTTTCACATTGCATCAACTTGGTGGACCTCTGTCATTGGGAGTAGATGATGAATCCCCAGAAATCCACAATAATGGAGATGGGCAGTCACCAATATCAACCCGTGAATTAAAATCCAGCCCACCTCCAAAACGTGTTAAAGTGGGAACTGAAAAATCATCTGTTAGGATCCAGGCTGACCCTATTTTGAACCGTACTGATGATGGATGCAACTTGCATACCTTGAATGCTAATCAGGGTGAGAATGCGTTGGGGGGGAGCTTAGAGGGGAAACCTGAAAACCTTGAAGGCACAGATGATACTCCATCTGACTCTGAAAGTGTGCAAGCAAGATACTCAGCTTTCCAGAAGGTGACAAATACTAGAAACCAAATTTCAGATTTGACCATTTTTAACTACTGCCTAGGAGGCATCAACGAGCGATGTCTGCTGCTCAAGGAGGTTGCAACCTCTGCTACCGACCAAGAGATGACAAACTTCGCACAGCAGATTTCCCTGTACACTGGGTGTTCCCACCATTGGTACCAAATATCAATTGCAAAGAGATTGGTACAGGAGGGGACTGATACTTGGGACTCTATCTCACAAGGCAACTACCAGGTTCTTTGGGAAAATGCAGTTATTGAGATTGAAGAGCATTTCATGAAGATCTCTCACTGCAATACTAGGTGTCTGACAGAACAGGACTTTGAGCTTCTGCGGAGAATTTCTGGATGCCGGGATAATATGACCCGTGAAAACTTTGACAAGATGTGGAATTGGTTATATCCGATAGCTTTCACACTATCAAGAGATTGGATAAATGGAATATGGGGGTGTACATCACCTAAGTGGATAGAGGGATTGATTACAAAGGAAGAAGCAGAGGCTTCACTTAGAGGTCCAAGGGGACTCCAAGAACCTGGGACCTTCATACTGAGGTTTCCTACTTCACGGAGCTGGCCCCACCCAGATGCTGGTAATTTGATTGTTACTTATGTTAGTGCTGATTACACTCTTCGCCACAGGCTGCTTTCTCTTAACTATAGGGAAACAAATCAAAAACCACTGCAAGACTTGCTACTGGCAGAATCCCAACTCACTCGATTGGGAAGGGTCACAAGATCAGTCACCAAGTTTGCTTGA 2157 0.4465 MAAQVSVVHEDDYSLLKDLKLEIDREEPTFSLCLWIYLLSSIRSPATIIRQMHSDIEGDAPFLVLNKEKKMMLLPLLFLHEDAPRPGNHSWTEVPCASAEIGCPLEKWVHVACEVSKNVVRLHIDGVLVGEKSLSSSLKNESDLDDLRITLAGTDGDNGRLQGYVHYARILPLTSINDHFVKNPPVELSIDSSCASEIEEGGDGVWSIVGGKASCRRNFNLDVVLLDAFGHPVNKEMEVVASLIYADNGTSVEKPNDAEAPLLTSYDGIEFASSERPSKLLHGRASFKLKISQLSSKCDNRLFHVRFDSPKTGRYPFLEACSRPIRCISRNRNTRASTLQWKKSTFTLHQLGGPLSLGVDDESPEIHNNGDGQSPISTRELKSSPPPKRVKVGTEKSSVRIQADPILNRTDDGCNLHTLNANQGENALGGSLEGKPENLEGTDDTPSDSESVQARYSAFQKVTNTRNQISDLTIFNYCLGGINERCLLLKEVATSATDQEMTNFAQQISLYTGCSHHWYQISIAKRLVQEGTDTWDSISQGNYQVLWENAVIEIEEHFMKISHCNTRCLTEQDFELLRRISGCRDNMTRENFDKMWNWLYPIAFTLSRDWINGIWGCTSPKWIEGLITKEEAEASLRGPRGLQEPGTFILRFPTSRSWPHPDAGNLIVTYVSADYTLRHRLLSLNYRETNQKPLQDLLLAESQLTRLGRVTRSVTKFA* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00980 718 Gene3D SH2 domain 611 716 IPR036860 -
Eupl08g00980 718 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 171 IPR013320 -
Eupl08g00980 718 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 10 703 IPR001217 GO:0003700|GO:0006355|GO:0007165
Eupl08g00980 718 Pfam Concanavalin A-like lectin/glucanases superfamily 27 170 - -
Eupl08g00980 718 MobiDBLite consensus disorder prediction 355 404 - -
Eupl08g00980 718 SUPERFAMILY SH2 domain 618 705 IPR036860 -
Eupl08g00980 718 MobiDBLite consensus disorder prediction 418 449 - -
Eupl08g00980 718 Gene3D - 6 182 - -
Eupl08g00980 718 ProSiteProfiles Src homology 2 (SH2) domain profile. 622 679 IPR000980 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Eupl08g00980 Laminin_G_3 2.7e-07 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00980 - - ming:122090068 1050.04