Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl08g00962 | ATGCCTCTTCGAATTGACCTCTTCGCTCCTCCTCCACCTCCACCACCTCCTCCTCCATTACTAGAAGCTCACAACAATGGAGGTTCTTCCTCATCTTCAGGAAAAGATCTCAACCCTAGCCTTCTCATTATTGCTCTCATCCTCACCGTCGTTTTGTTTGTCTCCGTCTGTCTCCACCTCCTCCTCCGCTACCTCAATCGTCGTTGTAGTTCCGGTGACGATGAAGACGATGTGACGCCTATCGAGCCTCTCCACGTTCACCGCCTCTCTAGCCGACGCGTATTGCCCGAAGAACATCAAACCCTAATCGACTCTCTCCCTCTCTTCTCCTTTAATTCCGTCACTGGTCTCCGTTCCTCCGCCTCCGCTGATTGCGCCGTTTGTCTTTCCAAATTCGAACCGCAGGATCAGCTCCGCCTCCTCCCGATCTGCTGCCACGCTTTCCATTCTCGCTGCATCGACACGTGGCTTGCATCTAACCATACATGTCCTCTATGTCGGTCCACCATCCACGTGGCTGAATCTGATGGTTACTTGAAGCTGTTCTCATCATCTACCAACAGTGAGAGTTTCCGGCTTGAGATCGGGAGCGTAAGTCGCCGGAGAATGCCTTCAGATTCAGGTGACGTCCGGATGCGATCGTATTCGGTGGGATCGTTTGAGTACCTGGTGGAAGATGAGTCCGAGGTTGTAGTGGAGCCCACACACCGACGGGGAATTTCAGAATCCAGTTTTAGCAGGAAGAAGGATGAGGTATCGTCGCCGGTAACGGAGACACCGCCAGAACCACCGGGACCATCCGTAGTGGCGGAAGTCGGCGGAGGGAGAGGATGGTTGAAGGATTACGTGGACAAGTTAGCCTCATCATCTTCGTCGTCGTTCTCTTCGCGCGCTCTCTCATTTCGATTTTCGGGAAGAATTTTCACAGGAAGTAGTCGACGGAGTGAATATACAGGAAGCGGTAGCCGAAGCGAGGGTGGCGCCGCCGTTGCCAGTGGTGGCGGGAGTTGGGATTTGGAGGGAAACAGATACGGTGAGGACATCAGCAATTTTTTTCGGTGGCTGTCAGGGGTATAA | 1077 | 0.533 | MPLRIDLFAPPPPPPPPPPLLEAHNNGGSSSSSGKDLNPSLLIIALILTVVLFVSVCLHLLLRYLNRRCSSGDDEDDVTPIEPLHVHRLSSRRVLPEEHQTLIDSLPLFSFNSVTGLRSSASADCAVCLSKFEPQDQLRLLPICCHAFHSRCIDTWLASNHTCPLCRSTIHVAESDGYLKLFSSSTNSESFRLEIGSVSRRRMPSDSGDVRMRSYSVGSFEYLVEDESEVVVEPTHRRGISESSFSRKKDEVSSPVTETPPEPPGPSVVAEVGGGRGWLKDYVDKLASSSSSSFSSRALSFRFSGRIFTGSSRRSEYTGSGSRSEGGAAVASGGGSWDLEGNRYGEDISNFFRWLSGV* | 359 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl08g00962 | 358 | CDD | RING-H2_EL5-like | 124 | 167 | - | - | |
Eupl08g00962 | 358 | ProSiteProfiles | Zinc finger RING-type profile. | 125 | 167 | IPR001841 | - | |
Eupl08g00962 | 358 | SUPERFAMILY | RING/U-box | 103 | 173 | - | - | |
Eupl08g00962 | 358 | SMART | ring_2 | 125 | 166 | IPR001841 | - | |
Eupl08g00962 | 358 | MobiDBLite | consensus disorder prediction | 233 | 271 | - | - | |
Eupl08g00962 | 358 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Eupl08g00962 | 358 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 32 | 243 | - | - | |
Eupl08g00962 | 358 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Eupl08g00962 | 358 | MobiDBLite | consensus disorder prediction | 311 | 339 | - | - | |
Eupl08g00962 | 358 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 10 | 19 | - | - | |
Eupl08g00962 | 358 | FunFam | E3 ubiquitin-protein ligase ATL6 | 87 | 173 | - | - | |
Eupl08g00962 | 358 | MobiDBLite | consensus disorder prediction | 233 | 255 | - | - | |
Eupl08g00962 | 358 | Pfam | Ring finger domain | 124 | 167 | IPR001841 | - | |
Eupl08g00962 | 358 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 98 | 176 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl08g00962 | Eupl-Chr8 | 27263469 | 27265150 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl08g00962 | 58 | 214 | C3H Transcription Factor Family | AT2G18650 | 40.828 | 2.60e-24 | 101 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl08g00962 | K10663 | - | nnu:104606406 | 362.844 |