Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00946 ATGAAGTGTTTCTACTACTTCAAGGACAAATCCCGAGCTGGGAAAACAAAATCAGCACCGGACTTGAAAAATAAAAGCAAATCGGATAACTCGGCCGGAACTCGGGTGACCAAGTCTTCAGGATCAGTGGCCTCTCAGCGGAGCATACCAGAACTGTACGAAGAGAAGGCGCACAACTTGCGGGTGTTTACATTTTCAGAGCTCAGGAACGCCACTAATAATTTCAGTAGGTTGCTTAAGATTGGGGAAGGTGGGTTTGGGAGTGTCTATAAAGGTTCAATCAAGCCTCCTAATGGTCAGGGTGATCCAATTGTGGTTGCTGTGAAAAAGCTTAACAAGGAGGGTTTGCAGGGCCATAAACAATGGGTGGCAGAAGTTCAATTTCTTGGTGTTGTTGAGCACCCAAATCTTGTCAAACTTATAGGATACTGTGCTGTAGATGGTGAAAGGGGGATCCAACGATTACTGGTTTATGAGTTTATGCAGAATAGGAGCTTAGAAGATCATCTTTTCAACAGGGCTTTGCCTGCTCTTCCCTGGCATAAAAGATTAGAGATAGTCCTGGGTGCAGCTCAAGGATTGGTATATCTGCACGAAGGATTGGAAGTCCAGGTAATATATCGAGATTTTAAATCGTCAAATGTGCTATTGGATGAGAACTTCAAGCCGAAGCTGTCAGACTTTGGGCTTGCTAGGGAAGGGCCAACGGGCGAAAACACTCATGTATCGACAGCAGTAGTGGGGACATACGGGTATGCCGCCCCAGACTACATAGAGACCGGTCATCTCACAACTAAGAGTGATGTATGGAGTTTCGGTGTGGTGCTATATGAGCTCCTTACAGGCAGGCGGTCGTTGGAGAGAAACCGCCCGAGAACAGAACAGAAGCTTCTGGATTGGGTGAAACAGTTCCCGGCTGAGAGTAGGAAGTTCAGCATGATAATGGACCCACGTCTAGGAAACCAGTATTCTCTTAGTGCGGCGCGGAAAATTGCCAAGTTGGCAGACAGTTGCCTGTGCAAGAATCGGAAGGAACGTCCGGATATGAGTGAGGTGGTAGGGGGTTTGAAGCAAGCAATCCAAGATTCAGAAGTGAGAAGCCCTCAAGAGAAGAGGACTCCTGAGTCCTCTGGATCCAGCCCGGTGGACTCCAATAAGAAGCCGGATCAGGTGGATGGCTCTGAATCAGCAAAAAAGCGGATGACCCATCTGGGCACACTAAGGGAGCATGCAAACGCGGTCGGTAGAAGAAGATTTATGATCATGCAGAGGGCCAAAGTTCCTTAG 1287 0.4779 MKCFYYFKDKSRAGKTKSAPDLKNKSKSDNSAGTRVTKSSGSVASQRSIPELYEEKAHNLRVFTFSELRNATNNFSRLLKIGEGGFGSVYKGSIKPPNGQGDPIVVAVKKLNKEGLQGHKQWVAEVQFLGVVEHPNLVKLIGYCAVDGERGIQRLLVYEFMQNRSLEDHLFNRALPALPWHKRLEIVLGAAQGLVYLHEGLEVQVIYRDFKSSNVLLDENFKPKLSDFGLAREGPTGENTHVSTAVVGTYGYAAPDYIETGHLTTKSDVWSFGVVLYELLTGRRSLERNRPRTEQKLLDWVKQFPAESRKFSMIMDPRLGNQYSLSAARKIAKLADSCLCKNRKERPDMSEVVGGLKQAIQDSEVRSPQEKRTPESSGSSPVDSNKKPDQVDGSESAKKRMTHLGTLREHANAVGRRRFMIMQRAKVP* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00946 428 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 161 371 - -
Eupl08g00946 428 MobiDBLite consensus disorder prediction 25 43 - -
Eupl08g00946 428 Pfam Protein kinase domain 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00946 428 CDD STKc_IRAK 81 353 - -
Eupl08g00946 428 MobiDBLite consensus disorder prediction 12 43 - -
Eupl08g00946 428 SUPERFAMILY Protein kinase-like (PK-like) 57 353 IPR011009 -
Eupl08g00946 428 PANTHER OS01G0588500 PROTEIN-RELATED 32 361 - -
Eupl08g00946 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Eupl08g00946 428 MobiDBLite consensus disorder prediction 372 387 - -
Eupl08g00946 428 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00946 428 MobiDBLite consensus disorder prediction 388 411 - -
Eupl08g00946 428 Gene3D Transferase(Phosphotransferase) domain 1 161 380 - -
Eupl08g00946 428 ProSitePatterns Protein kinases ATP-binding region signature. 81 110 IPR017441 GO:0005524
Eupl08g00946 428 MobiDBLite consensus disorder prediction 350 411 - -
Eupl08g00946 428 FunFam Serine/threonine-protein kinase BIK1 42 160 - -
Eupl08g00946 428 Gene3D Phosphorylase Kinase; domain 1 46 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00946 Eupl-Chr8 26663001 26670007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00946 1 385 Glycoside Hydrolase AT3G07070 41.476 2.72e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl08g00946 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00946 - - nnu:104606397 688.723