Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00943 ATGTCCCTCAATCAATCCAGGGCTGAGAAGAGCGAGTCCCACTTGAGGAAACCTGCTCGATCCGGGAGCTCTGGTAATCAGAGGAGCTTCTCCGGAGCCGGCGGGAAGGGCGGCGGTGGTACCGCCCCTCCTCCACCATCTTCTTCTTCGTCGTCGACGAATCGAAGTTTTAAGAAATCTGGTAATGGACAAGGAGGGCAATCTAGGGTGAGCGCCCCAAGTGTGAATTCAGAGTCGAATGTTGCCGCTCCTCGTGTACTACAGAATGGTGCCCACGTACAACCCCCATTACATGGATCATCTGGTGTTGCTACCAAGCCAACAGATTCACCCCCTCCCAGAAGTACTCGACCTGTTCCGAAGGCTCCATCTTCTCAATCCACTGCTGCAGCTTCGGACTCGATGGCACCCACAACACCATCTAAAGGCGATGTGTCTAGGCCATTCGCTCTTCAATTTGGGAGCATCAGCCCTGGTGTCATGAATGGAATGCAGATACCTGCTCGAACTAGCTCAGCTCCGCCAAATTTAGATGAACAGAAACGTGACCAGGCACGCCACGATTCTTTTAAAGCTGTGCCCACATTGCCAATCCCTTCTGCTCCTAAGCAGCAGCAGCCGAGGAAGGATGCCAGTAGCATTAACCTACCTAACACCGGAGATTCCCATCCTTCGTCCCACGCCAAAAGAGATGTCCATGCCCAAGTTCCAGCTGCACCTGGCACCACCACGACTCAGAAGCCTTCTGTTCTTCCAATCACCGGAATGTCTATGCAAATGCCATTTCAGCAGCCACAGGTTCCTCTACAATTTGGTGGCCCCAACCCACAGATTCAGTCTCAGGGCATCACAGCATCTTCACTGCAAATGCCAATGCCATTACCGATGGGAAACACTGCCCAGCAGCAGGTGTTTGTTCCGAGTCTCCAGTCTCATCCATTACAGTCACAGGGGATGATGCATCAGGGCCAGAGCCTGAGCTTTGCATCTCAAATGGGTCATCAGCTGCCCCCTCAGTTGGGAAACATGGGACTCGGGATTGCCCCACAATTCGCTCAACAGCAGGCTGGAAAATATGGCGGTCTTCGCAAAGCTGTTAAAATAACACATCCAGAGACTCATGAAGAGTTGAGGCTTGGTAAAAGGACAGATTCGTATTTGGATAGTGGGTCCTCAGGCCCGAGGTCACATCCTAATATGCCCCCCCAGTCCCAGCCCATTTCATCTTTTAACCAAGCTCATCAGGTCAACTACTATTCCCCTATGCAACCCAATTCTTATAACCCTACTATGTTCTTTCAGACACAAACTTCTCATCCTTTGCCGAGTACCCAGATGACTACCGGTTCTCAGGCAGTGAGATTTAACTATCCAGTTGGACAGGGTTCACAAACTGGATCATTTATGAACCCTTCTGCTCTGAATCCCGTGCCTATTACTAAAACCGGGCCTCCAATGCCTGGCCTTGCTGAACCATTGAACTCGGAACATGCTCACAATACTCATGCAGTAGCAGCCTCTGTTCCCTCGGCTTCCGTTCAGGTGACTGTGAAGCCAGCTGTTGGGTCACTTGGAGAAAAGGTTGGGTCCTCTTCAGTGACAGTTAGCTCACCTGTTGCTAGCAAGAGTGAATTGCCAAAATATTCAAGGCCACCTGGCGAAGGTAGCACATTTCATTCACAAAGGGATACTGTGATCAGTTCAGAAAGTTCTGTTCAGCAGTCAAAATCTGTTTCTGAACCATCAGGTTCCATTCCATTGGCTGTCACAGCTAAACATTCTACTACAGCATCCGCCGCTGTCTCAGTGCACAGACTGCCCCCCAGTATCTCATCCGCTGCTCCTGAGGAGTCTGGCTCTGTTGTGGCCAACACTGAAAGCAGAAGAAAGGAAGCTATTAGAAGGTCAGATTCTTTTAAGGATCAACCGAAGAAGCTGAGCAGAAAAGATCTGAGATACTCCCAGTCACAGCATCAGACAGATGCCTCTGATTCTGCTGGTAGTTCAAAGTCGTCGTCATTGAAGATGTCCATGGAAGTAACCAAGCACCCTGAGAATATCCAGGCTTCTCCTTTAGAGGTGGTTGAATCATCCACCTCTATCTCAAGCTTGCCTTCTTGGGGCTTAGAGCATAGTTGTTCTTTGAAAGATGGAAATTCTGAAACTGTACAAGGTAAAGCAACTCCTACTTCATCAGAAACATCTGGAGGGGTATTGGGATCCACTGAAGAACCATTGCCCAATGTTCCTGCAGGTCCTGCTTCTGAAGTAGTGTCAGATGGTGTTCAAATTGGGGAGGGGTCAACCTGTGAACCATCAAACACATCTGGTCGTGAATCGGAGGGAACTGTTTCTGATAATTTGGGTGCTGCTGGTCATTCAAAGCAAGGTGATTGTACTTTGCAGGAGGGTCTACTGAAGCAAGAAATTACGAGGACAGCGGAAGAAGGGAAAACTGAACCACCTGAAGGGCCCAAACAACATAGTAGAAAATCTGAAATGCCTACAGAATCTCTGGAAAGCGATAGACAAACTAAGCAGAAAGATTCCAATGTGGAAGAAACATCTATTGGCAATGAGTCTGGTTCCGTGGAAACTGAACCGGAAATGAATGAAGGACAAGTGGGTTGTAGCTCAGAAGTTGACAGGACTATTGATAACTTAATAAAGTCTGCAACCACATCTTCGGATTCCATTGAAGCTGAAACCACCTCTTCTAGGTTTCTTTCTCATGATAATGAAAAATCGACTGCTGATGCCTTAACAACTAGAAGTGAAAGGACTGATTGTCAAGATGTTGAAATAAGAGAATACGGTACAGTGCACCCACAGTCGACTCCTGTTCCGACTTCGATTTGCTCAGAAGTGACTCCGAAACTAGAAGGGAAAGGTACAGAGACTACCAGCGGTGGCCCAGTTTCCACTTCAGTGTCAGGTTCCAAGGATAAGCCCACTTTAGAACCAAATAGGGTAAAGAGTACCGCATCAAAAGTAAAGAAAAAGAAAAAAGACATTCTTAAGGCAGCAGATGCTGCTGGGTCAATTTCTGATCTTTATATTGCATATAAGGGTCCGGAGGAAAAGCAAGAAACTGCCAATTCTTCTGAAACTATAGAAAGCTCATCCAGCGTCAATGTGAAGCAGGAACCTGCAGATGATTCTGAGAAGGATGTTGTAGCAAGTGAGGAAGATGGGCAGAGTAAAGTTGAGCCAGATGATTGGGAAGATGCTGCCGACATCTCAACTCCAAAACTGGAAACCTCGGATATTGCAAAACAGGTTCATGGCGGCTTGATGCATTATGGTGAAGATGGAAACGGATTTACGGGCAAAAAGAAGTACTCTAGAGATTTTCTCCTGACATTCTCAGAGCAATGTACTGTTCTTCCTGTAGGTTTTGACATAGGATCTGATATAGCAGATGCCCTGATGAGTGTTAAAGTAGGCAGTTCTCATCGTATTGATCGTGAATCACATCCAAATTCTGGAAGAATTATAGATAGGGGGAGTGGGGGCCCTCGCCGGGGGAGTGGTATGGTGGACGATGACAAATGGAGCAAATCACCTGGTCCTTTTGCTTTGGGACGGGACCCAGCTCATGGAGGAGCTGTTGCAGGTTTTCGACCAGGCCAAGGAGGCAATCATGGTGTTTTAAGGATCCCACGTGGGCCGTCATCTGGACAGCATGTAGGTGGTATTCTCTCTGGGCCGATGCAATCCCTGGTATCTCAGGGTGGGATGCAACGGAATAGCTCTGATGCTGATCGGTGGCAGCGTACTGGTAGCCAGAAGGGTTTGATTCCTTCTCCTCAGACTCCTTTACAGATAATGCACAAAGCTGAGAGGAAGTATGAAGTGGGTAAAGTGTCAGACAAGGAAGATTCCAAGCAAAGGCAGTTGAAAGCTATCCTCAACAAATTAACTCCGCAGAACTTTGAAAGACTTTTCGAGCAAGTCAAAGATGTTAACATTGACAATATGGTCACGCTCACTGGTGTCATCTCGCAGATCTTTGATAAAGCTCTTATGGAGCCAACTTTTTGTGAAATGTATGCAAACTTCTGTTCCCGTCTTGCGAGAGATTTGCCTGATCTCAATGAGGACAATGAAAAGATCACCTTTAAGAGATTGCTTCTGAACAAGTGCCAGGAGGAATTTGAGAGAGGGGAAAGAGAGCAAGCAGAAGCTAATAGAGTTGAGGAGGAGGGCGAGATTGAACGCTCTGAAGAGGAGAGGGAAGTAAAGAAGACCCAGGCACGAAGGCGGATGCTGGGGAATATTAGATTGATTGGAGAATTGTACAAGAAGAGGATGTTGACTGAGAGAATAATGCATGAATGCATCAAGAAGTTGCTGGGTCAATATCAGAGTCCCGATGAGGAAGATGTCGAAGCTCTATGTAAGCTAATGAGCACAATAGGGGAGATGATAGACCATCCCAAGGCCAAGGAACATATGGATGTATACTTTGACATGATGATAAAGATGTCAAACAACATGACACTATCTTCTAGGGTGAGATTCATGTTGAAGGATGCAATTGATCTGAGAAAGAATAAATGGCAACAGAGGAGAAAAGTTGAAGGGCCAAAAAAGATTGAGGAAGTGCACAGGGATGCTGCTCAAGAACGGCAAGCGCAAGCTAGTAGGCAGGTTCGTGGTCCAAGCATTAGTTCTTCAGCAAGAAGGGGACAACCTATGGATTTTGGTCCTCGAGGCTCAACTGTGTTGTCTTCTCCAAATGCCCAGATGGGTGGTCTTCGTGGGTTACCGCCTCAGGTTCGTGGATATGGTGCTCAAGATTTTCGTATGGAGGACAGACATCCTTACGAAAGCAGGACACTGTCAGTTCCCTTGCCGCAAAAGCCTATTGATGATGATTCTATTACCCTTGGTCCCCAAGGTGGTCTTGCTAGGGGTATGTCTATCAGAGGACAGCCACCGATGTCAAGTGTTCCCTTGGCTGATATGTCTCCAAGTCCTGGAGACTCCAGACGATTTGCATCTGGTCCAAATGGTTACAGTTCTGTATCAGAGTTTACAACTTATAATTCACGAGAGGAACTCGTGCCAAGATCCATGCCAGAGAGGTTTGTGGGGATGCCTGCTTATGAACAATCAAACTCACATGAACGTCCATATTTCGGGAACCAGGATTTACGAAATTCAGATCGTTCTGTTGATAGATCTATGGCAACCTCACCTTCCACACGTGTGCAGGGATCTTCTACTGTTGTACAAAATGTTGCTTCAGAAAAAGTGTGGCCTGAAGAACGTCTTCGAGACATGTCCATATCCACAATTAGAGAATTCTACAGTGCCAAAGACGAGAAGGAGGTTGCTTTATGTATCAAAGACTTGAACTCCCCAAGTTTCTATCCATCTATGATATCTATCTGGGTCACTGACTCTTTTGAGAGGAAGGACATGGAGAGGGATCTTTTAGCTAAGCTTCTCATCAACCTCACCAAGTCTCGAGATAGATTGTTAAGTCAAATCCAGCTCATCAAAGGGTTTGAATCTGTTCTCTGTACTTTGGAGGATGCTGTGAATGATGCCCCAAAAGCGGCGGAGTTTCTCGGCCGTATCCTTGCCAAAGTCATCATAGAAAATGTCATTCCCTTGAAAGATATTGGGAAGCTAATACATGAAGGTGGTGAGGAGCCAGGACGTCTTCGAGAAATTGGGCTTGCGTCAGAAGTTCTTGGCAGCATCCTCGAGATCATAAGATTAGAGAAAGGAGAATCCGTCTTGAATGAGATCCGCAGAAGCTCCAATATGCGGTTGGAGGATTTTCGGCCCCCAGATCCCATCAATTCGAGGAAGCTAGATGCATTTATTTAG 5844 0.4683 MSLNQSRAEKSESHLRKPARSGSSGNQRSFSGAGGKGGGGTAPPPPSSSSSSTNRSFKKSGNGQGGQSRVSAPSVNSESNVAAPRVLQNGAHVQPPLHGSSGVATKPTDSPPPRSTRPVPKAPSSQSTAAASDSMAPTTPSKGDVSRPFALQFGSISPGVMNGMQIPARTSSAPPNLDEQKRDQARHDSFKAVPTLPIPSAPKQQQPRKDASSINLPNTGDSHPSSHAKRDVHAQVPAAPGTTTTQKPSVLPITGMSMQMPFQQPQVPLQFGGPNPQIQSQGITASSLQMPMPLPMGNTAQQQVFVPSLQSHPLQSQGMMHQGQSLSFASQMGHQLPPQLGNMGLGIAPQFAQQQAGKYGGLRKAVKITHPETHEELRLGKRTDSYLDSGSSGPRSHPNMPPQSQPISSFNQAHQVNYYSPMQPNSYNPTMFFQTQTSHPLPSTQMTTGSQAVRFNYPVGQGSQTGSFMNPSALNPVPITKTGPPMPGLAEPLNSEHAHNTHAVAASVPSASVQVTVKPAVGSLGEKVGSSSVTVSSPVASKSELPKYSRPPGEGSTFHSQRDTVISSESSVQQSKSVSEPSGSIPLAVTAKHSTTASAAVSVHRLPPSISSAAPEESGSVVANTESRRKEAIRRSDSFKDQPKKLSRKDLRYSQSQHQTDASDSAGSSKSSSLKMSMEVTKHPENIQASPLEVVESSTSISSLPSWGLEHSCSLKDGNSETVQGKATPTSSETSGGVLGSTEEPLPNVPAGPASEVVSDGVQIGEGSTCEPSNTSGRESEGTVSDNLGAAGHSKQGDCTLQEGLLKQEITRTAEEGKTEPPEGPKQHSRKSEMPTESLESDRQTKQKDSNVEETSIGNESGSVETEPEMNEGQVGCSSEVDRTIDNLIKSATTSSDSIEAETTSSRFLSHDNEKSTADALTTRSERTDCQDVEIREYGTVHPQSTPVPTSICSEVTPKLEGKGTETTSGGPVSTSVSGSKDKPTLEPNRVKSTASKVKKKKKDILKAADAAGSISDLYIAYKGPEEKQETANSSETIESSSSVNVKQEPADDSEKDVVASEEDGQSKVEPDDWEDAADISTPKLETSDIAKQVHGGLMHYGEDGNGFTGKKKYSRDFLLTFSEQCTVLPVGFDIGSDIADALMSVKVGSSHRIDRESHPNSGRIIDRGSGGPRRGSGMVDDDKWSKSPGPFALGRDPAHGGAVAGFRPGQGGNHGVLRIPRGPSSGQHVGGILSGPMQSLVSQGGMQRNSSDADRWQRTGSQKGLIPSPQTPLQIMHKAERKYEVGKVSDKEDSKQRQLKAILNKLTPQNFERLFEQVKDVNIDNMVTLTGVISQIFDKALMEPTFCEMYANFCSRLARDLPDLNEDNEKITFKRLLLNKCQEEFERGEREQAEANRVEEEGEIERSEEEREVKKTQARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQSPDEEDVEALCKLMSTIGEMIDHPKAKEHMDVYFDMMIKMSNNMTLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQASRQVRGPSISSSARRGQPMDFGPRGSTVLSSPNAQMGGLRGLPPQVRGYGAQDFRMEDRHPYESRTLSVPLPQKPIDDDSITLGPQGGLARGMSIRGQPPMSSVPLADMSPSPGDSRRFASGPNGYSSVSEFTTYNSREELVPRSMPERFVGMPAYEQSNSHERPYFGNQDLRNSDRSVDRSMATSPSTRVQGSSTVVQNVASEKVWPEERLRDMSISTIREFYSAKDEKEVALCIKDLNSPSFYPSMISIWVTDSFERKDMERDLLAKLLINLTKSRDRLLSQIQLIKGFESVLCTLEDAVNDAPKAAEFLGRILAKVIIENVIPLKDIGKLIHEGGEEPGRLREIGLASEVLGSILEIIRLEKGESVLNEIRRSSNMRLEDFRPPDPINSRKLDAFI* 1948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00943 1947 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 343 1947 IPR045208 GO:0003743
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 554 584 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 851 868 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 809 850 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 608 1006 - -
Eupl08g00943 1947 Pfam MA3 domain 1764 1874 IPR003891 -
Eupl08g00943 1947 SUPERFAMILY ARM repeat 1755 1937 IPR016024 -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1545 1563 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 527 543 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1049 1078 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 380 408 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1 250 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1520 1544 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1615 1675 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1237 1270 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1707 1745 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1205 1273 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1034 1048 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 623 655 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 691 741 - -
Eupl08g00943 1947 FunFam Eukaryotic translation initiation factor 4G 1297 1533 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 385 408 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1389 1413 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 205 223 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1153 1185 - -
Eupl08g00943 1947 SMART if4_15 1297 1520 IPR003890 GO:0003723|GO:0005515
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 766 790 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 907 936 - -
Eupl08g00943 1947 FunFam Eukaryotic translation initiation factor 4G 1753 1946 - -
Eupl08g00943 1947 ProSiteProfiles MI domain profile. 1759 1883 IPR003891 -
Eupl08g00943 1947 SMART ma3_7 1760 1874 IPR003891 -
Eupl08g00943 1947 Coils Coil 1379 1420 - -
Eupl08g00943 1947 Gene3D - 1297 1533 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 164 178 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1710 1745 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 961 983 - -
Eupl08g00943 1947 Pfam MIF4G domain 1297 1520 IPR003890 GO:0003723|GO:0005515
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 43 84 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 120 141 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1520 1596 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 877 906 - -
Eupl08g00943 1947 SUPERFAMILY ARM repeat 1290 1522 IPR016024 -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 524 584 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 656 679 - -
Eupl08g00943 1947 Gene3D - 1753 1947 - -
Eupl08g00943 1947 MobiDBLite consensus disorder prediction 1024 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00943 Eupl-Chr8 26519627 26558592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00943 1 646 Eukaryotic Initiation Factors Gene Family AT3G60240 40.560 7.18e-85 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00943 K03260 - nnu:104606395 2294.23