Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00932 ATGGGAAAGAAAAAGACTGAGGAGACCGGTGCAGCACCAGCAGCCATGAAGGGAAAGCCCAGCAAAGATGCTGCCAAAGATGGGAAGAAAGAGAAGCTTTCAGTCTCAGCCATGCTTGCCAGTATGGACCAAAAACCTGATAAACCTAAGAAGGGCTCTTCCTCCACTACTAATAAGCCCAAGTCCAGGGCAGCACCCAAACTTCCGTCATACACTGATGGCATCGATCTTCCCCCCTCCGATGATGATGATAACTACGCATCTGAAGGAGACCACCAGAATGACCTTGACGATATTGTCACTGACATGAAGAGATCAAACCGGTGTTCCGATTTGAAGCCCCTCGACATCTCTGTATCCGACAAGGAGTTGAAGAAGCGAGAGAAGAAGGATCTGCTCGCCGCCCATGTAGCTGAGCAGGTCAGGCAGGAAGCTCTCAAGGATGATCGTGATGCCTTCACTGTCGTCATTGGTAGCCGGGCTTCTGTCCTTGATGCCGAAGATGATGCTGATGCTAATGTTAAAGATGTCACTGTTGATAATTTTTCTGTCTCCGCACGGGGGAAAGAGCTCCTCAAGAATGCATCGGTGAAGATTTCTCATGGGAAGAGGTATGGTTTGATTGGACCCAATGGAAAGGGCAAGTCGACGCTATTGAAGCTTCTTGCTTGGAGGAAGATCCCTGTGCCCAAGAACATTGATGTGCTTTTGGTCGAACAGGAGGTTGTTGGTGATGACAAGACTGCTCTTGAAGCTGTTGTTTCGGCCAATGAAGAGCTTGTCAAGCTCCGTCAAGAGGTCGCAGCTCTGCAAAATTCATCGTCTGCTGCTGGAGGCGATGAAGGGGACGATGATGATGCTGATGCTGATGCAGGTGAGAAGCTTGCTGAATTGTATGAGAGGTTGCAGCTGATGGGATCTGATGCAGCTGAGGCTCAGGCGTCGAAGATTCTTGCGGGATTGGGTTTCACCAAGGATATGCAGGGCCGGGCTACCCGGTCCTTTAGTGGTGGGTGGAGGATGAGAATCTCATTAGCTAGGGCACTGTTTGTGCAGCCAACCCTTCTATTGCTCGACGAACCCACCAACCATCTCGACCTTCGAGCTGTTCTCTGGTTAGAAGAGTACTTGTGTCGATGGAAGAAGACTCTTGTGGTGGTCTCACATGACCGGGATTTCCTCAACACTGTATGCAGTGAGATTATCCATCTTCATGACCAGAAGCTACATTTCTACCGTGGGAATTTTGATGATTTCGAGAGCGGTTATGAGCAGCGTCGCAAGGAGATGAACAAGAAGTTTGAGATCTATGACAAGCAGGTGAAGGCAGCGAAAAGGACTGGGAATCGGGTTCTGCAGGAGAAGGTCAAGGATCGAGCCAAGTTTGCTGCATCCAAGGAAGCCTCAAAGAACAAGGCAAAGGGAAAGGTTGACGAGGATGAGACCCTGCCAGAGGCCCCAAAGAAGTGGAGAGATTACAGTGTGGAGTTCCACTTTCCCGAGCCTACTGAGCTCACCCCGCCTCTCTTGCAGCTTATTGAAGTTAGTTTCAGTTATCCAAACAGGAAGGATTTCAGGCTCTCGAATGTTGATGTGGGTATTGATATGGGGACCCGAGTTGCAATTGTGGGGCCGAATGGAGCTGGGAAATCTACTCTGCTCAATCTTCTTGCCGGCGATTTGGTCCCCACTGAGGGAGAGGTGCGAAGGAGTCAGAAGTTGAGGATCGGGAGGTACTCGCAGCACTTTGTGGACCTATTGATGATGGAGGAGACCCCAGTCCAATATCTTCTCCGGCTTCATCCAGAACAAGAGGGACTTAGCAAGCAGGAGGCAGTTCGTGCGAAGCTTGGGAAATTTGGGCTGCCCAGCCATAACCATCTTACCCCTATTGCCAAACTGTCTGGAGGGCAGAAAGCTCGTGTTGTCTTCACTTCAATCTCCATGTCGAAGCCCCACATTTTGTTATTGGACGAACCGACGAATCATCTCGACATGCAGAGCATTGATGCACTGGCCGATGCTCTGGATGAGTTCACGGGTGGTGTTGTCTTGGTCAGTCATGACTCTAGGTTAATATCGCGGGTCTGTGATGACGAAGAGAAGAGTGAAATCTGGGTAGTAGAAGATGGGACCGTGAGAACTTTCCCAGGGTCATTTGAGGAGTACAAGGAGGAGCTGCAGAGAGAGATTAAAGCAGAGGTTGATGATTAA 2214 0.4991 MGKKKTEETGAAPAAMKGKPSKDAAKDGKKEKLSVSAMLASMDQKPDKPKKGSSSTTNKPKSRAAPKLPSYTDGIDLPPSDDDDNYASEGDHQNDLDDIVTDMKRSNRCSDLKPLDISVSDKELKKREKKDLLAAHVAEQVRQEALKDDRDAFTVVIGSRASVLDAEDDADANVKDVTVDNFSVSARGKELLKNASVKISHGKRYGLIGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKLRQEVAALQNSSSAAGGDEGDDDDADADAGEKLAELYERLQLMGSDAAEAQASKILAGLGFTKDMQGRATRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYDKQVKAAKRTGNRVLQEKVKDRAKFAASKEASKNKAKGKVDEDETLPEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRKDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLMMEETPVQYLLRLHPEQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEEKSEIWVVEDGTVRTFPGSFEEYKEELQREIKAEVDD* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00932 737 CDD ABCF_EF-3 510 712 - -
Eupl08g00932 737 ProSitePatterns ABC transporters family signature. 335 349 IPR017871 GO:0005524|GO:0016887
Eupl08g00932 737 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 510 735 IPR003439 GO:0005524
Eupl08g00932 737 Coils Coil 427 447 - -
Eupl08g00932 737 Gene3D - 174 461 IPR027417 -
Eupl08g00932 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 428 IPR027417 -
Eupl08g00932 737 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 154 731 - -
Eupl08g00932 737 FunFam ABC transporter F family member 4 175 459 - -
Eupl08g00932 737 FunFam ABC transporter F family member 4 475 737 - -
Eupl08g00932 737 SMART AAA_5 536 712 IPR003593 GO:0016887
Eupl08g00932 737 SMART AAA_5 201 415 IPR003593 GO:0016887
Eupl08g00932 737 MobiDBLite consensus disorder prediction 1 105 - -
Eupl08g00932 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 721 IPR027417 -
Eupl08g00932 737 Gene3D - 473 737 IPR027417 -
Eupl08g00932 737 Pfam ABC transporter 527 662 IPR003439 GO:0005524
Eupl08g00932 737 MobiDBLite consensus disorder prediction 463 483 - -
Eupl08g00932 737 Pfam ABC transporter 192 363 IPR003439 GO:0005524
Eupl08g00932 737 MobiDBLite consensus disorder prediction 85 105 - -
Eupl08g00932 737 CDD ABCF_EF-3 177 408 - -
Eupl08g00932 737 Coils Coil 724 737 - -
Eupl08g00932 737 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 177 438 IPR003439 GO:0005524
Eupl08g00932 737 Coils Coil 253 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00932 Eupl-Chr8 26323010 26325223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00932 510 713 Calmodulin-binding Proteins AT2G36910 27.803 8.08e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00932 K06184 - nnu:104600385 1190.64