Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00919 ATGGAGGAGCGTTATGAGCCATTGAAGGAACTTGGGTCTGGGAACTTTGGGGTGGCGAGGCTGGTGAGAGATAAGAAGACTAAGGAGCTTGTTGCAGTCAAATACATCGAGAGGGGGAAGAAGATTGATGAGAATGTTCAAAGGGAAATCATCAACCACAGGTCTTTGAGGCATCCGAACATTGTTCGGTTCAAGGAGGTCTTGTTGACACCAACACATCTCGCTATTGTCATGGAATATGCGGCCGGTGGTGAGCTCTTCGAGAGGATATGCAGCGCCGGTCGATTTAGTGAGGATGAGGCAAGATTTTTCTTCCAGCAGCTAATCTCTGGAGTCAGCTACTGCCATTCTATGGAAATATGTCACAGGGACCTGAAACTGGAAAATACGCTCTTGGATGGCAGTGCGACTCCACGCCTTAAAATATGCGACTTTGGTTATTCTAAGTCTGCTATATTACACTCACAACCTAAATCAACAGTTGGAACGCCAGCATACATTGCTCCAGAGGTCCTGTCACGTAAGGAATACGATGGCAAGATAGCAGATGTTTGGTCCTGTGGTGTAACACTGTATGTAATGTTGGTAGGAGCATATCCCTTTGAGGATCCGGAGGATCCTAGGAATTTCCGAAAGACTATCGGGAGAATAATGAGTGTTCAGTACTCCATACCAGACTATGTACGTGTATCCGCAGATTGTAGGGACCTCCTCTCTCGAATTTTTGTCGCTAACCCATCAAAAAGGATCACCATCCCCGAGATAAAAAAACAGGCTTGGTTTCTAAAGAACTTGCCCAGAGAGCTGGTGGAAGGTGAGAAAACAAACTACAAGGATGTAAACAGTGACCAACTTGCCCAGAGCATTGAAGAGATAATGCGGATTATACAAGAGGCGCGGACACCTGCAGAAGGTTCTAAAGTCGGCAGTCAGTCCTTAGTAGGCAGCATGGACCCCGACCCCGACGACATAGAAGCTGATTTGGAATCTGAAGTTGACTACAGTGACGATTTTGTTGCCCGCGTGTGA 1029 0.4674 MEERYEPLKELGSGNFGVARLVRDKKTKELVAVKYIERGKKIDENVQREIINHRSLRHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSATPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIMSVQYSIPDYVRVSADCRDLLSRIFVANPSKRITIPEIKKQAWFLKNLPRELVEGEKTNYKDVNSDQLAQSIEEIMRIIQEARTPAEGSKVGSQSLVGSMDPDPDDIEADLESEVDYSDDFVARV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00919 342 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Eupl08g00919 342 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Eupl08g00919 342 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Eupl08g00919 342 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00919 342 PANTHER SERINE/THREONINE KINASE 3 290 - -
Eupl08g00919 342 SUPERFAMILY Protein kinase-like (PK-like) 3 270 IPR011009 -
Eupl08g00919 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Eupl08g00919 342 MobiDBLite consensus disorder prediction 300 342 - -
Eupl08g00919 342 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Eupl08g00919 342 CDD STKc_SnRK2 4 260 - -
Eupl08g00919 342 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Eupl08g00919 342 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00919 342 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00919 Eupl-Chr8 25907904 25920589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00919 4 280 CBL-interacting serine-threonine protein kinases AT4G24400 43.902 9.32e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Eupl08g00919 Pkinase 8.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00919 K14498 - vvi:100243594 606.675