Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00916 ATGGCTCAAGACCTCTCCCCTTCCCCCTCCACTCGCCCCACCCCACAAGCCCCTAGAAGGGTTCCACCACCATGTTGGACCCACGACGAGACAGTAGCCCTCATCGATTCTTACCGTGAAAAATGGTATTCTCTGCGTCGCGGCAATCTCAGGGCGTCTCACTGGCAAGAAGTCGCAGACTCTGTTGCCCGTCGATGTCGCCTCGCCACTCCATCCAAAACCTCCGTCCAATGCCGTCACAAGATCGAAAAGCTCCGGAAGCGATACCGCACCGACACACAACGCGCCCTCACCATGACCACACCCAATCGTTTCTCCTCTTCTTGGGTTTACTTCCGGAAGATGCAAGCCATGGAGAGGGGTTCCGATGTTGATTCCGATGAGAATGGTGATGACGATGGCAACGACGATGCCGATGAAGATGACGACGACGATGAAGATGGTGCGGATGATGATGACGATGACAAGATCAACACCCATACGCGTAATCTCCATCATCTGACGACTAACGGAGGCGGTGGAGGATTTCGTGTTAGACATCCTGGTGGGCTACGTCCGGTACCGACTGTTACAGGGTTTGCGAAACCAAAGAATTATGGTAGGGTTGATGAAAACCCTAACCCTAGTCCTCACCCTAACCCTAGCTCTAACCCTACGATTTTGAATGGTAGTTCTTGGTCGAGATCAGGGTTTGGGAGGAGTGGTGGAAGTGGGAGTAAAAGAGAGATGGATCCGGTTGCGGAGATGGTTTCGTCGATTAGGTTGTTGGGAGAAGGGTTTGTTAAGATGGAGCAGATGAAAATAGATATGGCGAGGGAGATGGAACAGATGCGAATGGAGATGGAGATGAAGCGGACTGAGATGATTCTAGAGTCGCAGCAGCGGATTGTTGAAGCCTTCACTAAAGGGTTTTCTGGGAAGAAGAAGGTGAAGAGAATGCCATCACCGGATTCTTAA 957 0.5162 MAQDLSPSPSTRPTPQAPRRVPPPCWTHDETVALIDSYREKWYSLRRGNLRASHWQEVADSVARRCRLATPSKTSVQCRHKIEKLRKRYRTDTQRALTMTTPNRFSSSWVYFRKMQAMERGSDVDSDENGDDDGNDDADEDDDDDEDGADDDDDDKINTHTRNLHHLTTNGGGGGFRVRHPGGLRPVPTVTGFAKPKNYGRVDENPNPSPHPNPSSNPTILNGSSWSRSGFGRSGGSGSKREMDPVAEMVSSIRLLGEGFVKMEQMKIDMAREMEQMRMEMEMKRTEMILESQQRIVEAFTKGFSGKKKVKRMPSPDS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00916 318 MobiDBLite consensus disorder prediction 125 153 - -
Eupl08g00916 318 FunFam Trihelix transcription factor ASIL2 26 91 - -
Eupl08g00916 318 Gene3D - 26 91 - -
Eupl08g00916 318 ProSiteProfiles Myb-like domain profile. 26 86 IPR001005 -
Eupl08g00916 318 MobiDBLite consensus disorder prediction 120 243 - -
Eupl08g00916 318 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 7 303 IPR044823 -
Eupl08g00916 318 MobiDBLite consensus disorder prediction 216 234 - -
Eupl08g00916 318 Pfam Myb/SANT-like DNA-binding domain 24 118 IPR044822 -
Eupl08g00916 318 MobiDBLite consensus disorder prediction 1 23 - -
Eupl08g00916 318 SMART 118neu2 33 123 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00916 Eupl-Chr8 25780050 25783533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00916 25 115 Trihelix Transcription Factor Family AT3G14180 35.165 3.25e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl08g00916 Myb_DNA-bind_4 1.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00916 - - nnu:104609819 334.724