Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00913 ATGCATTTCATTTTGCCTATTTTCTTCAGGTCAAGAGACTTGTACAAGGATCCTGATGATGGCCGCCAACGTTTTCTGCTTGAGTTGGAATTTATTCAGTGTCTAGCTAATCCAACTTATATCCACTATTTGGCTCAGAACCGGTACTTTGAGGATGAAGCTTTCATTGGTTACTTGAAATACCTTCAATATTGGCAACGGCCAGAATACATAAAATTCATAATGTATCCACATTGCTTGTATTTTCTCGAGCTTCTCCAAAATGCAAACTTTCGCAATGCAATGGCACATCCAGGCAGCAAGGAATTGGCGCATAGGCAACAGTTCTTTTTTTGGAAGAACTATAGGAACAATCGGTTGAAACACATTGTACCAAGGCCTCTTCCTGAACCCGTTGCTGCACCTCCAGCTTCAGTGCCACCACCAACACTAGTGCCAGCTACAGCTGTTGCTCCTTCTCCTGCTCCAGCCCTTTCTCCTATGCAGTATGGCATGCCACCTGGATCTACTCTCTCAAAGGCTGATGTGAGAAATATTGGGGGCGACCGAAGAAAGAGAAACTTATGGGAGATAGACAAAGCTTCTCTCTTAGGCATGGATTTCAGTGTTGCCCGCTTGGAGGTGGGAGGCAGGGAGGGGTATATCCCTAGAAAGATCATTGTTGAGGACATGGGAGCTCTATTCTCCGTCAGGCTGGAGGTCCTTGTGGAAGGTTCAAAGGTAGTGACCGATGCTGATGGTAAGAGGGAGGTAACAACAGTTGTGGGTAAGTCAGAGGAATCCCAGACACTCAAGAGTCAGCTCGTGAAGCAGTGTTCTGGTGTTCTGACCTCTTGGAGTAGGGTGGCGACGGTCGTTAGTGAGGAGGGAGGTGGTGGCATGTCGCTGGGGCTGGAAGCTGTGAGCTTCGTCGTTGAGATAGCTGAAAATGGGGTAGAAATTGTGGTGATGGGTTCTTATGGGAGGAGGTCTGGAGTGGTCGGTACGATCAAGCATGTGGTTGAAGGAGGACCTCTCACTCTGGCCCACACAATTGTTTTAGAAAGGAATACTTTGAGTTTCAAACTCAATGCGTGTGCAGAGGTGGAGGCATCGTTTATTTCATCTGCGACGTCTTCCCCCCTCCCTCCAGAGAAGCAGCAGGAGAGCTTCATTGTAACGGAGGTCGAATGTGGTGGGGATCGACTGGTGGAGCTTGAGAAAGGGGACAAAGGCTCTTCCTCTGAGAAGTTGGGCTTATTTTTGCCTAAGGTTTACGTTAAAGGGGACGACGATAAGGCTAAGCAGGCCTATGTGCTTGAGCAGGGTGTAGCCTCTCCGGTGGACTTGCATGGTGGGGCGAATAAGTCAACGGTTAACCTTCCTCTAGTTTGTGTTCCAGCGGAGGGGCACGAAGAAGTCCGTGATTTGTTGCTTGCCATTGTGGGATGTCCAAGGGATCTGCAATTTAGACCTAGAAAGGCCCAAATGTTAATTGATGAAGGCAATGGAGGATCTACTTCGGAGAAGGAAGCCAGAGAAGATGAGGATATGACTCTTAAGACACCCTGTGGGGATGGGAAGGAGGGTTGTGAGGGTTTTAATGGCACTAGGGAAGGGGTAGGGAATTAG 1611 0.4842 MHFILPIFFRSRDLYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPGSKELAHRQQFFFWKNYRNNRLKHIVPRPLPEPVAAPPASVPPPTLVPATAVAPSPAPALSPMQYGMPPGSTLSKADVRNIGGDRRKRNLWEIDKASLLGMDFSVARLEVGGREGYIPRKIIVEDMGALFSVRLEVLVEGSKVVTDADGKREVTTVVGKSEESQTLKSQLVKQCSGVLTSWSRVATVVSEEGGGGMSLGLEAVSFVVEIAENGVEIVVMGSYGRRSGVVGTIKHVVEGGPLTLAHTIVLERNTLSFKLNACAEVEASFISSATSSPLPPEKQQESFIVTEVECGGDRLVELEKGDKGSSSEKLGLFLPKVYVKGDDDKAKQAYVLEQGVASPVDLHGGANKSTVNLPLVCVPAEGHEEVRDLLLAIVGCPRDLQFRPRKAQMLIDEGNGGSTSEKEAREDEDMTLKTPCGDGKEGCEGFNGTREGVGN* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00913 536 MobiDBLite consensus disorder prediction 499 516 - -
Eupl08g00913 536 MobiDBLite consensus disorder prediction 492 536 - -
Eupl08g00913 536 Pfam SOH1 23 115 IPR008831 GO:0003712|GO:0006355|GO:0016592
Eupl08g00913 536 FunFam Mediator of RNA polymerase II transcription subunit 31 11 112 - -
Eupl08g00913 536 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 10 112 IPR038089 -
Eupl08g00913 536 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 17 187 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Eupl08g00913 Med31 9.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00913 K15153 - rcu:8275441 267.314