Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00895 ATGGGAATCTTAAGTAACAGTAATGACGCCATCGCCGAGTTGTCGAGAAAGCGGCAGTTGGAAATCGTTAGTACCGATGTTTCTTTGGATGTTCCTATGAAGTATAAACGGCGGAAGGTCTCTGCGCACCGAGATTTCCCGAAAGGTTGTGGGCGATTTGCTCCAAGAATCAATGAAAAACAGAGTGCAGATGCACTTTCGATTGGTTCCATTGAGAACTCGACACATAGGGAAGAGGGTGCTGCTCTTGTAGAACTTGACTCTGTTAAACAGTCAGGAAGTTTGGGTGAGTCTGGAACTCTTGAATTGGCTAAAAATTCAGATTTGATTGAATCATCCAACTTGATGCAAGCTGAGACTACAAAATCGTTCGTAAGTTTGGATCAGGCGGAAGTGCTTGAACCAATGAAAACTGTGGAGCCCGTGGCAGTGGAGAATCCAAAATTTTTGGATCAGACAGAGTTGTTCAATCCATCAACAACTTTAGAACCTGAAACTATGGACTTGTCGAAGAATTTAAATCAGACAGAATTACTTGGTTCCATGAAGAATTCATATAGGCCTGAGTCCATGAATGTGTTAGAAAATGCTTCTCAGCCTGAAGAGAAAGATTTTTTGAATAATTTGGCATTGTACTCACCAATAGATATTGTCCCACCAGACATATTGGTATTGTCAAAGGTTTCGAATCAACCTCAAACATCAATTCCTGTTGTCGAAGCTGTGGAACTTGAGAGCACATCTAATAAATATCCTCCTCGGAGAAGAATCTCAGCTTCCCGAGATTTTCCTCCCGGTTGTGGGAGAAATGCCCCATGTGTTAGCAAAGAAGAATGCCTAAAATCAATTGCCTTTAACAAAAACAGGAGTTTGGGTACTGAGAAATCTAGTGGGGAAAACACGTCATCGGAGCAGATGTTTAGGGATGATGCCAATCAAATAAGAGAGAAAGTTCAGGATGGAGATGCTGTCAAGTGCAAACTGAAAGGGAATATTAACGAAGACATTGGGGGAAAAGTTTGGGTAAAATCAGAAGGGGTTGTGAAGAAAGAGGTGGCTGAGCACGTTCAAGTCAGAAAAGCTTCTGAGAGTAAGTTGAAACAGGAAGATGCAGAGGAAAACAGTATCAGGTCTCCACGCGAGAGCAATTTCTCTCGATTAGTCCTGAAGTCCTCGTTAGTTAGCAAAAAAATTGACAGAGATTTCGGAAGCTCTGTGGGGAAATTGTCGAAGGAATCTGTGAACCTCAGCAAAGACAAGAGTTTTAAGAGAAAGTTTCCTGGGGAGTCTGAAAATGAATGTTGTGCTATAAATCAATCTCAAAGAGAAGAATCTATTGGTTTTGAAATTTCTAATGATAGGGTGATTGTGCAGGCTTTGATGGCTGCACCAAATTGTCCATGGAGGCAGGGTAAGCGGGCTTTCAAATCTCCGAATGTTCTCACCCATGGAACGGGCAGAAACAAAGTAAAGAAGATAGCGGTGGACAAATCTAAATCTGTTTTTAGGAAAAAGCAGGATGAAGCAGAATATTCAGTAGAAAAATCTATAAAGGACAAAATGCCTCCCACAGGAACGGCTGGTTATCAAGGCATGAATCAACTGGTTGCCATAGATGAGGATGAATCTCCAGGACATGGTGAAGAAGATGAAAACCTTCCTATGGTTCAAAGATCACAAGACTTGGAGCTGAGCGTGATTCCATTCGGTCTCCATACTCTGGTTGATAAAGATAATGACTGTGAAGCTGTTGTTACCCGTAACAAAGTCAGGGAGACTCTGCGTCTGTTCCAAGCGATCTGTAGGAAACTCTTGCAGGAAGAGGAAGCAAAGTCGAAGGAACATGGAAATGCCGGGCGGATTGATCTAACGTCCGCAAGGATTCTCAAGGACAAACACAAATGGGTGAACACTGGCAAGCCGATTTTGGGTCCTGTCGCCGGAGTTGAAGTTGGTGATGAGTTTCATTACAGGGTGGAGCTCGCTATCATCGGCCTTCATCGCCCATTTCAGGGTGGTATAGATTCCTTAAAGAAAGGTGGTAAAATTCTGGCCACAAGTATTGTGGCTTCCGGGGGTTATGCTGATGACATGGACAGTTCTGATGTCTTGGTATATTCTGGCCAAGGAGGAAATATGACGAGCAGAGATAAGCAACCTGAAGATCAGAAGCTTGAGCGAGGAAACCTTGCACTGAAGAACAGTATAGATGAAAGAACTCCTGTTAGGGTCATTCGTGGAATTAAAGAAATGAAAGGCTCTGAATCTCTGGATGTAAGGGGTAAGATGGTTACGACATACACCTATGATGGGCTGTACTTGGTTGAGAAGTATTGGCAGGAAAAGGGGCGTTATGGTAATTTTGTCCTTATGTTCCAACTGAGAAGAATTCTGGGGCAACCAGAGCTTGCTTGGAAAGAAGTGAAGAAATCAAAGAAATCAACTGTACGTGAGGGTCTCTGTGTAGATGATATTTCTGAAGGAAAAGAGAAGAGGCCCATCTGTGCTGTGAACACTATAGACAATGAGAAACCCCCACCATTCAAATACATAACCAATATGATATATCCCTCTTGGTACAACCCTACTCTCCCTAGGGGTTGCGATTGCACTGATGGATGCTCAGATTCTGTGAAATGCATCTGTGCAGTCAAGAATGGAGGGGAGATCCCGTTCAACTATAATGGGGCTATCGTGGAAGAGAAGCCCCTTGTTTACGAGTGCGGTCCTTCTTGCAGGTGCCCTCCTTCTTGCCATAACAGAGTTAGTCAGCATGGTTTAAAATTTCAGCTAGAGATCTTCAAGACTGAATCAAGGGGATGGGGTGTCAGATCCCTAACTTCGATCCCCTCTGGAAGTTTTATCTGTGAGTATACGGGAGAGCTGCTCCAGGATAAGGAAGCTGAACGGAGGACTGGTAATGATGAGTATCTGTTTGACATTGGGAATAACTATAATGACCATGCTCTCTGGGATGGACTCTCGACTCTAATACCCCCCGATTTGCAATCCAATAATTCCTGCGAAACTGTAGAGGATGTGGGCTTCACCATCGATGCGGCGCAGTATGGGAGTGTGGGGAGATTCATCAACCATAGTTGTTCACCTAACCTTTATGCACAAAATGTCCTGTATGATCATGATGACAAGAGAATGCCCCACATAATGCTCTTTGCTGCCGAGAACATCCCTCCTTTACAAGAGCTAACTTACCATTACAATTATATGATAGATCAGGTGCGTGACTCCAATGGTAATGTCAAGAAAAAGAATTGCTACTGTGGTTCTCTCGAGTGCACTGGCAGGCTGTATTGA 3315 0.4353 MGILSNSNDAIAELSRKRQLEIVSTDVSLDVPMKYKRRKVSAHRDFPKGCGRFAPRINEKQSADALSIGSIENSTHREEGAALVELDSVKQSGSLGESGTLELAKNSDLIESSNLMQAETTKSFVSLDQAEVLEPMKTVEPVAVENPKFLDQTELFNPSTTLEPETMDLSKNLNQTELLGSMKNSYRPESMNVLENASQPEEKDFLNNLALYSPIDIVPPDILVLSKVSNQPQTSIPVVEAVELESTSNKYPPRRRISASRDFPPGCGRNAPCVSKEECLKSIAFNKNRSLGTEKSSGENTSSEQMFRDDANQIREKVQDGDAVKCKLKGNINEDIGGKVWVKSEGVVKKEVAEHVQVRKASESKLKQEDAEENSIRSPRESNFSRLVLKSSLVSKKIDRDFGSSVGKLSKESVNLSKDKSFKRKFPGESENECCAINQSQREESIGFEISNDRVIVQALMAAPNCPWRQGKRAFKSPNVLTHGTGRNKVKKIAVDKSKSVFRKKQDEAEYSVEKSIKDKMPPTGTAGYQGMNQLVAIDEDESPGHGEEDENLPMVQRSQDLELSVIPFGLHTLVDKDNDCEAVVTRNKVRETLRLFQAICRKLLQEEEAKSKEHGNAGRIDLTSARILKDKHKWVNTGKPILGPVAGVEVGDEFHYRVELAIIGLHRPFQGGIDSLKKGGKILATSIVASGGYADDMDSSDVLVYSGQGGNMTSRDKQPEDQKLERGNLALKNSIDERTPVRVIRGIKEMKGSESLDVRGKMVTTYTYDGLYLVEKYWQEKGRYGNFVLMFQLRRILGQPELAWKEVKKSKKSTVREGLCVDDISEGKEKRPICAVNTIDNEKPPPFKYITNMIYPSWYNPTLPRGCDCTDGCSDSVKCICAVKNGGEIPFNYNGAIVEEKPLVYECGPSCRCPPSCHNRVSQHGLKFQLEIFKTESRGWGVRSLTSIPSGSFICEYTGELLQDKEAERRTGNDEYLFDIGNNYNDHALWDGLSTLIPPDLQSNNSCETVEDVGFTIDAAQYGSVGRFINHSCSPNLYAQNVLYDHDDKRMPHIMLFAAENIPPLQELTYHYNYMIDQVRDSNGNVKKKNCYCGSLECTGRLY* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00895 1104 ProSiteProfiles Pre-SET domain profile. 866 926 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl08g00895 1104 SUPERFAMILY PUA domain-like 626 810 IPR015947 -
Eupl08g00895 1104 CDD SET_AtSUVH-like 846 1075 - -
Eupl08g00895 1104 ProSiteProfiles Post-SET domain profile. 1088 1104 IPR003616 -
Eupl08g00895 1104 SMART G9a_1 639 800 IPR003105 -
Eupl08g00895 1104 Gene3D SET domain 817 1104 IPR046341 -
Eupl08g00895 1104 Pfam Pre-SET motif 825 921 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl08g00895 1104 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 252 1096 - -
Eupl08g00895 1104 ProSiteProfiles YDG domain profile. 644 796 IPR003105 -
Eupl08g00895 1104 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 189 1104 IPR025794 GO:0016571
Eupl08g00895 1104 SMART preset_2 822 913 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl08g00895 1104 MobiDBLite consensus disorder prediction 359 379 - -
Eupl08g00895 1104 SMART set_7 929 1080 IPR001214 GO:0005515
Eupl08g00895 1104 SUPERFAMILY SET domain 813 1075 IPR046341 -
Eupl08g00895 1104 Pfam SET domain 940 1074 IPR001214 GO:0005515
Eupl08g00895 1104 ProSiteProfiles SET domain profile. 929 1074 IPR001214 GO:0005515
Eupl08g00895 1104 Gene3D - 625 816 IPR036987 -
Eupl08g00895 1104 Pfam SAD/SRA domain 643 800 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00895 Eupl-Chr8 25329214 25349964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00895 587 1103 Su(var)3-9 homologs AT5G04940 39.587 4.76e-114 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl08g00895 SAD_SRA 6e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00895 K11420 - nnu:104598395 1135.17