Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00886 ATGGAAGGAGACCGAGGAGCTCCGCGCAGTTGCTACGAGCTTGAGGTCTCGCTCTCCAGTCCTCCACAGCCAATTCATGAGATGGGGTTTGTCCAGTTTGAAGAAAACCAGGGCCTAAGCTTCTTGGTTCCCTCTCAATCTTCTCAGGTTTCTCTGCCTTTCAACAACAACAGCAACAGCAACAGCAACAACAACAACCACCAAATTGGGTTTAGTAACAACGACCTTGTTCCTAGGCCTTCTTGGAATACTGACCAGGTTGGGACTTTGGATCCCAAGGTTGTTAACGATGAGAACTGCACTGGTAACGTTAACGATGGCAACAGTTCATGGTGGAGGAACTCATCCTCAGAGAAGAGCAAGGTGAAGGTAAGGAGGAAGCTTAGAGAACCAAGGTTCTGTTTCCAAACAAGGAGTGATGTAGATGTACTAGATGATGGTTACAAATGGAGGAAATATGGCCAAAAAGTTGTGAAGAACAGTCTGCATCCTAGAAGTTATTATCGTTGCACGCATAACAATTGTCGAGTGAAGAAGAGGGTTGAACGATTATCTGAGGATTGTCGAATGGTGATAACGACCTACGAAGGCAGACACACCCACTCTCCTTGCGATGACTCAAATTCATCTGAACATGAATGTTTCAACTCATTTTAA 657 0.4521 MEGDRGAPRSCYELEVSLSSPPQPIHEMGFVQFEENQGLSFLVPSQSSQVSLPFNNNSNSNSNNNNHQIGFSNNDLVPRPSWNTDQVGTLDPKVVNDENCTGNVNDGNSSWWRNSSSEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHTHSPCDDSNSSEHECFNSF* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00886 218 SUPERFAMILY WRKY DNA-binding domain 136 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl08g00886 218 SMART WRKY_cls 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00886 218 ProSiteProfiles WRKY domain profile. 139 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00886 218 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 205 IPR044810 GO:0003700
Eupl08g00886 218 FunFam WRKY transcription factor 57 130 204 - -
Eupl08g00886 218 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00886 218 Gene3D WRKY domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00886 Eupl-Chr8 25021685 25053454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00886 1 218 WRKY Transcription Factor Family AT2G44745 59.912 8.15e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl08g00886 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00886 - - nnu:104598400 352.829