Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00849 ATGGCAACTGCTATCTCGATCTTCCTGTTCATCGTTCCAGTGGCTCATGCCGTTGAGTTTATTGTTGGAGATAGTGCTGGCTGGACATCTGGGGTGAACTACAGTGCTTGGACTGCTGGCAAAACCTTCACAGTGGGTGACAAGCTCTTGTTTAACTATGCTTCAACACACCAAGTGGACTTGGTGAGTCAGAATGACTATGACACTTGCTTCACTGGCAATGCCCTATTGAACTATATCGATGAAAATACCGTCATTACCCTTAACGAAGTCGGGCCTATGTACTTCCTATGTCCAACGTCCGGTCACTGTGGGCAAGGGATGAAACTAGCAGTCGATGTTTCTTCCATGAACAATACGCCAGGAAAGGGGAAGAACTCATCCAAAATTATTATAATTGTTGCCATAGTTATTTTAGTGATACTTCTCTCCACCATCACCATTTGCTTCCATTTATTACGAAAAAGAAAGGCAACAAGGGAAGTTGATGTTGAGATTAAAAATGAAGAATCCTTGCAATTCGACTTGAATACAGTAAGAGCTGCCACAAATAACTTCTCCAATGCTAATAAGCTCGGTCAAGGTGGATTTGGTTCTGTTTACAAGGGTGGGCTTTCAAATGGGCAAGAAATAGCTGTGAAGAGGCTTTGTAAAAACTCTGGACAAGGTGAAAAAGAATTTAAGAATGAGGTTATATTAGTTGCCAAACTTCAACATAGGAATCTTGTTAGGCTCCTAGGTTTTTGTTTGGAAGGAGAAGAAAAGTTGCTCATCTACGAGTTCGTGCTAAACACAAGCCTCGATCACTTTATATTTGATCCAACCAAACGTGCCTATTTGGATTGGGAAAAACGTTACAAAATCATAGGAGGGATTGCTCGAGGTCTTCTCTATCTTCACGAAGATTCTCGATATAGGATTATTCATCGAGATCTCAAAGCTAGCAATATTTTGTTAGATGCAGAAATGAATCCCAAAATTTCAGATTTTGGTGTGGCAAGGCTTTTTGTAGTAGACCAAACTCATGACAATACTAGTCGAATTATCGGAACACATGGATATATGGCCCCAGAGTATGCAATGCATGGACAGATCTCGGTGAAGTCAGATGTCTTTAGTTTTGGTGTCTTACTTCTGGAGATTATAAGCGGCAAGAAGAACAATCGTATCTATCAGTCAGACCATGCTACGGACCTTCTGAACTCTGCTTGGAGACATTGGATGGAAGGGAAAGCTTTTGAGTTGATAGATCCCATTTTGAGGAAATGTTGTTCAAGAAGTGAAGTAATGAGATGCATCCATATTGGGTTATTATGTGTTCAAGAAGATGTAGCTGACAGACCCACCATGGCATCGGTTGTTCTCATGCTCAGTAGCTACGCTGCAACTCCTCCATTACCTTCACCACCTGCACATTTTATGCATAATAGAATAGAGTCCGGCATGCCTATGAGCAACATGAATCACGAGCATCTATTGGACCAATTTACATGTAACTCGGACCATGGATTGTGA 1515 0.4139 MATAISIFLFIVPVAHAVEFIVGDSAGWTSGVNYSAWTAGKTFTVGDKLLFNYASTHQVDLVSQNDYDTCFTGNALLNYIDENTVITLNEVGPMYFLCPTSGHCGQGMKLAVDVSSMNNTPGKGKNSSKIIIIVAIVILVILLSTITICFHLLRKRKATREVDVEIKNEESLQFDLNTVRAATNNFSNANKLGQGGFGSVYKGGLSNGQEIAVKRLCKNSGQGEKEFKNEVILVAKLQHRNLVRLLGFCLEGEEKLLIYEFVLNTSLDHFIFDPTKRAYLDWEKRYKIIGGIARGLLYLHEDSRYRIIHRDLKASNILLDAEMNPKISDFGVARLFVVDQTHDNTSRIIGTHGYMAPEYAMHGQISVKSDVFSFGVLLLEIISGKKNNRIYQSDHATDLLNSAWRHWMEGKAFELIDPILRKCCSRSEVMRCIHIGLLCVQEDVADRPTMASVVLMLSSYAATPPLPSPPAHFMHNRIESGMPMSNMNHEHLLDQFTCNSDHGL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00849 504 CDD Phytocyanin 18 114 - -
Eupl08g00849 504 Pfam Plastocyanin-like domain 28 108 IPR003245 GO:0009055
Eupl08g00849 504 CDD STKc_IRAK 192 457 - -
Eupl08g00849 504 Pfam Protein tyrosine and serine/threonine kinase 189 431 IPR001245 GO:0004672|GO:0006468
Eupl08g00849 504 SMART serkin_6 186 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00849 504 FunFam Cysteine-rich receptor-like protein kinase 17 153 261 - -
Eupl08g00849 504 Gene3D Transferase(Phosphotransferase) domain 1 263 464 - -
Eupl08g00849 504 Gene3D Phosphorylase Kinase; domain 1 147 261 - -
Eupl08g00849 504 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Eupl08g00849 504 FunFam cysteine-rich receptor-like protein kinase 10 262 463 - -
Eupl08g00849 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Eupl08g00849 504 Gene3D - 16 119 IPR008972 -
Eupl08g00849 504 FunFam Blue copper 16 120 - -
Eupl08g00849 504 SUPERFAMILY Cupredoxins 16 114 IPR008972 -
Eupl08g00849 504 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 81 491 - -
Eupl08g00849 504 ProSiteProfiles Phytocyanin domain profile. 18 116 IPR003245 GO:0009055
Eupl08g00849 504 ProSiteProfiles Protein kinase domain profile. 186 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00849 504 SUPERFAMILY Protein kinase-like (PK-like) 172 478 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00849 Eupl-Chr8 24180130 24206514 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00849 121 471 Receptor kinase-like Gene Family AT4G23230 60.112 6.47e-155 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl08g00849 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00849 - - nnu:104590182 500.745