Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00847 ATGGCTTCTGCGCTCTGTCATTTTCACCCTCTCTTGCTTGGTCTTCTTCTACCGCTCTTGGCCGTTGCTCAAAACATAATCTTGGGCACATCTCTCTCTGCTGTGGATAACAGCAACTCGTGGCTTTCACCATCTGGCGAATTCGCCTTTGGATTCCGTCGTCGCCAAATCAATGACGATAGCTTCTTGCTTGCCATCTGGTTTGACAAAATACCTGACAAAACCATAGTATGGTACGCAAACGGAGATAATCGAGCTCCAAGAGGATCGAAAGTCGAGCTTACGAATAGCGGCCAACTCGTGCTCAATGATCCTCAAGGCCGAGAGATATGGAAAGCAGAATTCACTAGCACCGATGGAGTCGCATCCGGTGCCATGCTCAACACCGGGAATTTTGTGCTTGCAAGTAGTAATTCTCGTTTTATATGGGAGAGCTTTAAGATACCTACAGACACCATCTTGCCTTCACAGATATTGGAAGTGGGTGACAAGCTTTCTTCTCGGTATAGGGAGGCCAACTACTCGAAGGGAAGATTCCAGCTTCGTCCACTCCCAAACGGAAATCTTGTGCTTAATGCTATACGTTTGCCAACAGACACTCCTTACGACGGACCTTATTATAAGAAAAATATTTCTGATTCCAGTTATCGGGTGGTCTTCAATGAGTCCGGCTACATTTATATTCTGAGAAGTAATGGAAGCATAGTCAGCCTCACATCGGGGAACATATTTCCAGTCGCAGATTTCTACTACAGAGCGACGCTTGATTTTGATGGAGTTTTCACGCAATACGCTCACCCAAGGAACAATTCTGGTGGCAACAGAAGCTGGTCCATTGTGTGGTTCATCCCCGATGACATTTGTGGTGCACCTTTTACAAATTTGGGTAGCGGTGCTTGTGGGTATAATAGCTTCTGCACCCTTACATCAGATAAGAGACCTAATTGCACATGCCTACCTGAATACTCCTTTGTGGATCCAAATGACAACTTCAGCGGTTGCAAACCGAAATTCTCACAAGAATGTCCAGAAGATTGGTCAACAAGCCCCGAAGATCTATTTGACATTCTGGTGTTGCCGAAGGTGATATTTCCTACGGGTGAGTACGAAGTTCTTGAAAAGTTTAGTAAAGAGGACTGCAGAAAATCTTGCTTGTATGACTGTTTCTGTGCATTTGCCGAATCTGGAGAAAATTGTTGGAAGAAGAGGCTACCATTGACATATGGCAGGATTGTCAATGATTCCGATGTGGCTTTCGTAAAAGTACGAAAAGCTGATTCTCGAGAGAATCTTCACCCTCCAATTTCAGGCGAAGGGGAGAATAAACAAGTGTCGTTGATCCTTTATTGTAGCTCTGTTGTTTTCAACTTCTTGTTGCTAGTTGCAATATTATCTCTGATTGTTTTGTTCACCTATCACAAGAAACGGAACAAAATTAAAAAAGTTCCAAGTGTTTTAGAAACGAGTCTACATTCTTTCACGTATAAAGAACTCGTAGAAGCTACAGATGGGTTCAAGGAAGAACTGGGCAGGGGTGCTTTTGGCATTGTTTATAAAGGGAATTTAGCTTTAGGTTCTGTAAACTATGTGGCCGTCAAGAAGTTAGACAATCTGGTTCAAGAACGTGAGAAGGAATTCAAAACGGAAGTGAGTGTGATTGGCCAGACCCATCATAAGAATCTAGTCCGATTGCTTGGATTCTGTGAGGAGGGGCCGCACCGGCTTCTCGCATATGAGTTCATGAGCAATGGCTCATTAGCAAGTTTCCTCTTCAGAATTCCGAAGCCTGATTGGAACCAAAGAACAGAGATTGCGTTCGGTGTCGCAAGAGGGCTCACGTACTTACACGAGGAGTGCAGCACCCAGATCATCCATTGTGATATAAAGCCTCAGAACATCCTTCTTGATGATTGTTTTAAGGCAAAGATTTCTGATTTTGGACTGGCAAAGCTTTTGATGTCTGACCAGAGTCTAACTCGTACAGTCATCAGAGGAACTAGAGGGTATGTGGCACCCGAATGGTTCAGGAACATACCAATTACAGTGAAGGTAGATGTTTATAGTTTTGGTGTCGTGTTACTAGAGATCATATGTTGTAGGAAGAGTATGGAGTTCGATTTGGAGGACGAAGGGAGAGCAATACTAACAGATTGGGCTTACGATTGCTTTAGAGAAGGGAAATTGAATGATTTGGTTGAGAACGATGAGGAGGCAATGAATGACATGAGAAGGCTTGAGATGTTGGTGATGATAGCCATTTGGTGTATTCAAGAGGAGCCATCGCTAAGGCCTACCATGAAGAAGGTCACACAGATGCTAGAAGGAAGCGTTGAAGTTTCTGTTCCCCCATGCCCTTGTCCCTTTAGCTCAGTTGGTTGA 2379 0.4401 MASALCHFHPLLLGLLLPLLAVAQNIILGTSLSAVDNSNSWLSPSGEFAFGFRRRQINDDSFLLAIWFDKIPDKTIVWYANGDNRAPRGSKVELTNSGQLVLNDPQGREIWKAEFTSTDGVASGAMLNTGNFVLASSNSRFIWESFKIPTDTILPSQILEVGDKLSSRYREANYSKGRFQLRPLPNGNLVLNAIRLPTDTPYDGPYYKKNISDSSYRVVFNESGYIYILRSNGSIVSLTSGNIFPVADFYYRATLDFDGVFTQYAHPRNNSGGNRSWSIVWFIPDDICGAPFTNLGSGACGYNSFCTLTSDKRPNCTCLPEYSFVDPNDNFSGCKPKFSQECPEDWSTSPEDLFDILVLPKVIFPTGEYEVLEKFSKEDCRKSCLYDCFCAFAESGENCWKKRLPLTYGRIVNDSDVAFVKVRKADSRENLHPPISGEGENKQVSLILYCSSVVFNFLLLVAILSLIVLFTYHKKRNKIKKVPSVLETSLHSFTYKELVEATDGFKEELGRGAFGIVYKGNLALGSVNYVAVKKLDNLVQEREKEFKTEVSVIGQTHHKNLVRLLGFCEEGPHRLLAYEFMSNGSLASFLFRIPKPDWNQRTEIAFGVARGLTYLHEECSTQIIHCDIKPQNILLDDCFKAKISDFGLAKLLMSDQSLTRTVIRGTRGYVAPEWFRNIPITVKVDVYSFGVVLLEIICCRKSMEFDLEDEGRAILTDWAYDCFREGKLNDLVENDEEAMNDMRRLEMLVMIAIWCIQEEPSLRPTMKKVTQMLEGSVEVSVPPCPCPFSSVG* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00847 792 Gene3D - 24 147 IPR036426 -
Eupl08g00847 792 ProSitePatterns Protein kinases ATP-binding region signature. 509 534 IPR017441 GO:0005524
Eupl08g00847 792 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Eupl08g00847 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Eupl08g00847 792 Gene3D - 149 271 IPR036426 -
Eupl08g00847 792 Coils Coil 728 748 - -
Eupl08g00847 792 Pfam Protein kinase domain 506 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00847 792 CDD B_lectin 42 146 IPR001480 -
Eupl08g00847 792 Gene3D Transferase(Phosphotransferase) domain 1 581 783 - -
Eupl08g00847 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 21 147 - -
Eupl08g00847 792 SMART serkin_6 503 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00847 792 ProSiteProfiles Protein kinase domain profile. 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00847 792 FunFam S-receptor-like serine/threonine-protein kinase 472 580 - -
Eupl08g00847 792 PIRSF SRK 1 792 IPR024171 GO:0004674
Eupl08g00847 792 Gene3D Phosphorylase Kinase; domain 1 467 580 - -
Eupl08g00847 792 FunFam Serine/threonine-protein kinase 150 291 - -
Eupl08g00847 792 CDD STKc_IRAK 509 775 - -
Eupl08g00847 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 785 - -
Eupl08g00847 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 781 - -
Eupl08g00847 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 192 IPR036426 -
Eupl08g00847 792 Pfam D-mannose binding lectin 75 161 IPR001480 -
Eupl08g00847 792 SMART blect_4 33 149 IPR001480 -
Eupl08g00847 792 SUPERFAMILY Protein kinase-like (PK-like) 485 774 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00847 Eupl-Chr8 24149628 24152006 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00847 483 775 Receptor kinase-like Gene Family AT1G60800 44.667 1.46e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl08g00847 Pkinase 9.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00847 - - nnu:104603603 886.33