Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00828 ATGGGCAGTGAGAAGATGGTGATGATGGTGGTGGTAACGGTAGTAAGCCTATTCTCGGTTGCATTTGCAATATCGGGAACTGCCACTTACTACACACCACCTTATGTTCCCTCGTCATGCTACGGCTACCAAAACAATGGTGTTATGATTGCGGCAGCTAGCGATGCCATATGGAATAACAGGGCTGCATGTGGGAGGAAGTACTCTGTAAGCTGCACAGGCCGTACAAACAATGGCGTTCTACAACCTTGCAGGGGGTCCAGCGTCGTCGTTACCATCGTTGATTATTGCCCACCCGGATGCCAGGGAACTATCGATCTATCTCAAGAAGCATTCTCCATGATTGCTGATCCTAACGCCGGCAAAATCAACATTGACTATAAGCAGGTTTAA 393 0.4835 MGSEKMVMMVVVTVVSLFSVAFAISGTATYYTPPYVPSSCYGYQNNGVMIAAASDAIWNNRAACGRKYSVSCTGRTNNGVLQPCRGSSVVVTIVDYCPPGCQGTIDLSQEAFSMIADPNAGKINIDYKQV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00828 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 130 IPR007112 -
Eupl08g00828 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 129 IPR044206 GO:0009627|GO:0048046
Eupl08g00828 130 FunFam Barwin-related endoglucanase 23 129 - -
Eupl08g00828 130 SUPERFAMILY Barwin-like endoglucanases 14 130 IPR036908 -
Eupl08g00828 130 Pfam Lytic transglycolase 51 127 IPR009009 -
Eupl08g00828 130 CDD DPBB_EG45-like 24 127 - -
Eupl08g00828 130 Gene3D - 23 130 IPR036908 -
Eupl08g00828 130 SMART dpbb_1 50 127 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00828 Eupl-Chr8 23701110 23703984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00828 3 129 Expansin Gene Family AT2G45110 30.769 8.71e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00828 - - aew:130750070 202.216