Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00827 ATGGAAAGAATTCCGGAATCGAAGACGCTTCCCGGGCAGTTGCCTATAGTTGGCCTGGTACCGAATACACCTGTGAATGTTGGAATAGAGGGAGATGGTTCATCCAGTGCGAGAGAATCTCAGAGTTCGGATTCACCTGTCATCGGAAAATCATGGAAAGGAAAAGGTTCTTTCCAGGAACAAGAGGAAGTTGTGCCTGATGTTGTGACCTTTAAGGGGAGTGGCGATTCCTGTGAAGACGGTGGCCCTAGTTCTTTCTCTGGGGCTAGTCATCCCCCGGAACCGGTTGACATGGATTTGATGAGACCAGTCTACGTAGCAATTGGCCAAAACAAATCCGAGCCTGGATGTTTGGTGAAAAGCTTGTCTATGAAGGGTCCTTTTCTAGAGGATCTATCAATAAGAGTTTCTGGTATGAAACCGAATACAGCTGTTCTCTCACCTGCAGAAAGCTTGGTTGAAGAGCCTAATGACTTGGGTGCATTATCTTCTCCATTTTCAATTCCTCGTGCATCACAAACTACAGAAAACATGCTTTTGCCACTGGATTCTGAGGAGAAGGAGTGTGTGTGGGATGCTTCTTTGCCTCCCAGTGGCAATGTAAGTCCACACAGTAGCATCGACAGTACGGGTGTCGTCACGGCTATGAGCATCGTCAATAGCTGCACCAGTACGTACAGGAGCGATGGGATTACTAGCGATGGTATGCTTAGTGTGGAAAGGAACTGTGAGAGTACCAAAGGAAGTGTTAGAGGAGACTCACTTGAGAGTGCAAAAACTAGCGTTAGCAGAGCAAGTGATAGCAGTGGCCTTAGTGATGACAGCAATTGGAGTAACATTACTGGGAGTGCTAATAAGCCTCACAAAGGAAACGATCCTAGGTGGAAGGCTATTCTTGCTGTTCGAGCACGGGATGGGATGTTGGGAATGAGTCATTTTAGATTGCTTAAACGGCTTGGGTGCGGAGACATCGGCAGTGTGTATCTCTCAGAGTTGAGTGGGACTAGGTGCTACTTTGCGATGAAAGTAATGGACAAAGCATCCCTTGCAAGCCGGAAAAAGTTGACGAGAGCTCAGACAGAGAGAGAAATTCTACAGCTACTGGACCATCCATTCTTGCCAACCTTGTACACACATTTTGATACAGACAGGTTCTCATGTTTGGTCATGGAGTTCTGTCCAGGAGGTGATTTGCACACTCTGAGGCAACGGCAGCCCGGGAAACACTTCTCCGAGTATGCAGCACGGTTTTATGCAGCAGAGGTGCTGTTGGCCCTTGAGTATCTCCACATGCTCGGAGTTGTCTACAGGGATTTGAAACCAGAAAACGTTCTTGTCCGTGATGATGGCCACATAATGCTGTCAGATTTCGACCTCTCCCTAAGGTGTGCAGTCTCACCCACCCTGATAAAGACCTCATTTGAGTCTGACCCCTCCAAACGGGGAAGTGGCGGTGCATTCTGCGTTCAACCTGCTTGTATTGAGCCTTCGTCTGTGTGCATCCAGCCTGCATGCTTCATCCCACGGCTCTTCCCTCAAAAAAGCAAGAAGAAAACCCGAAAACCTCGGACTGATCTTGGGCAGACCATTTCCGCCCTGCCTGAGCTTGTAGCAGAGCCAACAGCTGCCCGGTCCATGTCCTTTGTTGGTACCCATGAGTACCTTGCCCCAGAAATCATAAAGGGTGAAGGTCATGGCAGTGCAGTTGATTGGTGGACATTCGGTATTTTTTTGCACGAGCTATTATATGGGAAGACCCCATTCAAAGGCTCAGGCAACCGTGCAACACTGTTCAATGTGGTCGGACAGCAGCTGAGATTCCCAGAGTCACCCGTAACTAGTTACTCGAGCAGAGATCTGATCCGGGGCCTGCTGGTGAAGGAGCCCCAGCACCGACTCGGGGTGAAAAGGGGAGCAACAGAGATCAAGCAGCACCCATTCTTTGAAGGTGTGAATTGGGCACTGATAAGATGCAGCACGCCACCCGAAGTGCCAAGGCCAGTTGAGACGGAGTTGCCTGTTAAGTTCGGCACAGTTGAAGCTGTTGGGGTGGGGGGCAGCAGTAAGAGGATGGTAGGGGCAGACATGAAGTCTGGGGGTAAATATCTAGACTTCGAGTTCTTTTAG 2127 0.4937 MERIPESKTLPGQLPIVGLVPNTPVNVGIEGDGSSSARESQSSDSPVIGKSWKGKGSFQEQEEVVPDVVTFKGSGDSCEDGGPSSFSGASHPPEPVDMDLMRPVYVAIGQNKSEPGCLVKSLSMKGPFLEDLSIRVSGMKPNTAVLSPAESLVEEPNDLGALSSPFSIPRASQTTENMLLPLDSEEKECVWDASLPPSGNVSPHSSIDSTGVVTAMSIVNSCTSTYRSDGITSDGMLSVERNCESTKGSVRGDSLESAKTSVSRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAVRARDGMLGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFDTDRFSCLVMEFCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSFESDPSKRGSGGAFCVQPACIEPSSVCIQPACFIPRLFPQKSKKKTRKPRTDLGQTISALPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPVTSYSSRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETELPVKFGTVEAVGVGGSSKRMVGADMKSGGKYLDFEFF* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00827 708 PANTHER FLIPPASE KINASE 1-RELATED 72 670 - -
Eupl08g00827 708 SUPERFAMILY Protein kinase-like (PK-like) 295 670 IPR011009 -
Eupl08g00827 708 Pfam Protein kinase domain 545 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00827 708 Pfam Protein kinase domain 314 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00827 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Eupl08g00827 708 MobiDBLite consensus disorder prediction 243 286 - -
Eupl08g00827 708 FunFam Serine/threonine-protein kinase D6PK-like 311 396 - -
Eupl08g00827 708 MobiDBLite consensus disorder prediction 243 291 - -
Eupl08g00827 708 FunFam serine/threonine-protein kinase D6PK-like 543 666 - -
Eupl08g00827 708 Gene3D Phosphorylase Kinase; domain 1 311 396 - -
Eupl08g00827 708 FunFam serine/threonine-protein kinase D6PK-like 397 464 - -
Eupl08g00827 708 Gene3D Transferase(Phosphotransferase) domain 1 397 466 - -
Eupl08g00827 708 MobiDBLite consensus disorder prediction 1 94 - -
Eupl08g00827 708 SMART serkin_6 313 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00827 708 ProSiteProfiles Protein kinase domain profile. 313 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00827 708 MobiDBLite consensus disorder prediction 28 48 - -
Eupl08g00827 708 CDD STKc_phototropin_like 311 667 - -
Eupl08g00827 708 Gene3D Transferase(Phosphotransferase) domain 1 544 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00827 Eupl-Chr8 23657297 23665172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00827 46 708 AGC Kinase Gene Family AT2G44830 71.701 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl08g00827 Pkinase 9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00827 - - nnu:104610497 1238.4