Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00823 ATGGCTTCCGCGCTCTGTCATTTTCTCTCTCTCCTGCTTAGTCTTCTTCTACCTCTCTTGGCCGTTGCTCAAAATATAAGCTTGGGCAGATCTCTCTCTGCTGTGGATGACAATTCCTCATGGCTTTCCCCTTCTGGGGATTTCGCGTTTGGATTTCGTCGCCAAATCAATGACGATAGCTTCTTGCTTGCCATCTGGTTCGATAAAATACCCGACAATACCGTAGTATGGTACGCAAACGGAGATAATCTGGCTCCAAGAGGATCGAAAGTCGAGCTTACGAGTGGTGGCCAACTCGTGCTCAATGATCCTCAAGGAGGAGAGATATGGAAAGCAGAGTTAACCAGTACTGATCGAGTCGCTTATGGTGCGATGCTCAACACCGGCAACTTTGTGCTTGCAAGTAGTAATTCTAGCTTTATATGGGAGAGCTTTGATATACCTACCGACACCATCTTGCCTTCACAGATATTGGAAGTGGGTGGCAAGCTTTCTTCTCGGCAGAAGGAGGCCAACTACTCGAAGGGAAGATTCCAGCTTCGTCTACTCCCAGACGGAAATCTTGTACTTAATTCAATAGGCTTGCCAACTGAAACTGCTTATGATGCTTATTATATCAGTAACACTTTTGAGGCGGATTCCAACGATTCCGGATATCGGGTTGTCTTCAATGAGTCCGGCTACATTTATATTCTGAGAAGGAACGGAAGCATATTCAGCCTTACATCGGGGACCATATTTCTAATCACAGACTTCTACTACAGAGCGACTCTGGATTTTGATGGAGTTTTCACCCAATACGCTCACCCAAGGAACACTTCTGGTGGGAAAAGAGGCTGGTTCATTGTGTGGGCCATTCCCGATAACATTTGTGCTACAATTCCTGCTGGTTTGGGCAGTGGTGTTTGTGGGTTTAATAGCTACTGCACCCTTACATCAGATAGGAGGCCTAATTGTCAATGCCTACCTGACTACTCCTTGGCAGATCCAAATAACAACTTCAGCGATTGCCAACCAAAATTCTCACAAGGATGTCCGGAAGATGGCTCAAGAACCCCCGAGGATCTATTTGATATGCGGGTGCTGGAGAACGTGAATTTTCCAATGGGTGACTACCAAAACTTTGAATCTTATAATGAAGAGGACTGCAAAAAATCTTGCTTGCATGATTGTTTCTGTGCAGTTGCCATTTTTGGAACAAAATGTTGGAAGAAGAAGCTACCCCTATCAAACGGCAGGAAGCGCCCCAGCGAAAGAGCAGTAGCTCTCATAAAAGTAAGGAAAGCTGATACTCTTCAAGAGAATCGTCATCCTCCAATTTTAGGCAAATGCAAGAATGATCAAGCGAAGTTGATCCTTTTAGGTTGCTCTGCTTCTTTCAATTTCATATCGCTATCCATACTTACTCTGGTTGTTTTCTTCACGTACCACAAGAAATTGAACATAACTAACCCAGATGCAAGTGTTTTAGAAACAAATCTACGTTCCTTCACTTACAAAGAACTCCAAGAAACTACAGATGGGTTCAAGGAGGAGCTGGGCAAGGGTGCTTTTGGCATTGTTTATAAAGGGGTTTTACCATTAAGTTCAAGAAACTTTGTCGCGGTCAAGAAGTTAGACAATCTGGTTGAAGAACGTGAGAAGGAATTCAAAACGGAAGTGAGTGTGATTGGCCAGACCCATCATAAGAATCTGGTCCGATTGCTTGGATTCTGTGAGGAGGGTCCGCACCGGCTTCTGGTATATGAGTTCATGAGCAATGGCTCTTTAGCAAGTTTCCTCTTTGGAATTTCGAAGCCTGATTGGAACCGACGAAGAGATATTGCGTCCGGCATCGCAAGAGGGCTCATGTACTTACACGAGGAGTGCAGTACCCAGATCATCCATTGTGATATAAAGCCTCAGAACATCCTTCTTGATGATTGTTTTAAGGCGAAGATTTCCGACTTTGGACTCGCAAAGCTTTTGATGTCTGACCAGAGTCTAACTCGTACAGTCATCAGAGGAACTAGAGGGTATGTCGCACCTGAATGGTTCAGGAACATACCAATTACATCAAAGGTCGATGTTTATAGTTTTGGTGTCATGTTACTAGAGATAATATGTTGCAGGAAGAGTGTGGAGTTGGATTTGGAGGACGAAAGGAGAGCAATACTAACAGATTGGGCCTACGATTGCTTCAGAGAAGGAAGTCTGAATGATTTGGTTGAGAATGATGAGGAGGCAATGAATGACATGAGAAGGCTGGAAATGTTGGTGATGATAGCAATTTGGTGTATACAAGAGGAGCCATCGCAAAGGCCTACGATGAAGAAGGTCACACAGATGCTAGAAGGAGATGTTGAAGTTTCTGTTCCCCCATGCCCTTGTCGCTTTACCTGA 2382 0.4437 MASALCHFLSLLLSLLLPLLAVAQNISLGRSLSAVDDNSSWLSPSGDFAFGFRRQINDDSFLLAIWFDKIPDNTVVWYANGDNLAPRGSKVELTSGGQLVLNDPQGGEIWKAELTSTDRVAYGAMLNTGNFVLASSNSSFIWESFDIPTDTILPSQILEVGGKLSSRQKEANYSKGRFQLRLLPDGNLVLNSIGLPTETAYDAYYISNTFEADSNDSGYRVVFNESGYIYILRRNGSIFSLTSGTIFLITDFYYRATLDFDGVFTQYAHPRNTSGGKRGWFIVWAIPDNICATIPAGLGSGVCGFNSYCTLTSDRRPNCQCLPDYSLADPNNNFSDCQPKFSQGCPEDGSRTPEDLFDMRVLENVNFPMGDYQNFESYNEEDCKKSCLHDCFCAVAIFGTKCWKKKLPLSNGRKRPSERAVALIKVRKADTLQENRHPPILGKCKNDQAKLILLGCSASFNFISLSILTLVVFFTYHKKLNITNPDASVLETNLRSFTYKELQETTDGFKEELGKGAFGIVYKGVLPLSSRNFVAVKKLDNLVEEREKEFKTEVSVIGQTHHKNLVRLLGFCEEGPHRLLVYEFMSNGSLASFLFGISKPDWNRRRDIASGIARGLMYLHEECSTQIIHCDIKPQNILLDDCFKAKISDFGLAKLLMSDQSLTRTVIRGTRGYVAPEWFRNIPITSKVDVYSFGVMLLEIICCRKSVELDLEDERRAILTDWAYDCFREGSLNDLVENDEEAMNDMRRLEMLVMIAIWCIQEEPSQRPTMKKVTQMLEGDVEVSVPPCPCRFT* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00823 793 FunFam Uncharacterized protein 148 277 - -
Eupl08g00823 793 Gene3D Phosphorylase Kinase; domain 1 473 584 - -
Eupl08g00823 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 21 146 - -
Eupl08g00823 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Eupl08g00823 793 Pfam Protein kinase domain 510 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00823 793 SUPERFAMILY Protein kinase-like (PK-like) 487 778 IPR011009 -
Eupl08g00823 793 Pfam D-mannose binding lectin 74 160 IPR001480 -
Eupl08g00823 793 Gene3D - 21 146 IPR036426 -
Eupl08g00823 793 FunFam S-receptor-like serine/threonine-protein kinase 477 584 - -
Eupl08g00823 793 ProSiteProfiles Protein kinase domain profile. 507 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00823 793 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Eupl08g00823 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 785 - -
Eupl08g00823 793 Gene3D - 148 274 IPR036426 -
Eupl08g00823 793 SMART blect_4 32 148 IPR001480 -
Eupl08g00823 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 196 IPR036426 -
Eupl08g00823 793 PIRSF SRK 1 793 IPR024171 GO:0004674
Eupl08g00823 793 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 789 - -
Eupl08g00823 793 Gene3D Transferase(Phosphotransferase) domain 1 585 787 - -
Eupl08g00823 793 ProSitePatterns Protein kinases ATP-binding region signature. 513 538 IPR017441 GO:0005524
Eupl08g00823 793 FunFam Serine/threonine-protein kinase 149 294 - -
Eupl08g00823 793 CDD STKc_IRAK 513 779 - -
Eupl08g00823 793 Coils Coil 732 752 - -
Eupl08g00823 793 SMART serkin_6 507 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00823 793 CDD B_lectin 37 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00823 Eupl-Chr8 23574992 23577945 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00823 486 780 Receptor kinase-like Gene Family AT1G60800 43.709 1.06e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl08g00823 Pkinase 8.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00823 - - nnu:104603603 970.304