Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00819 ATGGCTTCCGCGCTCTGTCATTTTCTCTCTCTCCTGCTTAGTCTTCTTCTACCTGTCTTGGCCGTTGCTCAAAACATAAGCTTGGGAACATCTCTCTCAGCTGTGGATGACAACTCCTCATGGCTTTCACCTTCTGGTGATTTCGCCTTTGGATTCCGTCGCCAAATCAATGACGATAGCTTCTTGCTTGCCATCTGGTTTGACAAAATAACTGACAAAACCATTGTATGGTACGCAAATGGAGATAATCTGGCACCAAGAGGATCAAAAGTCGAGCTTACGAGTGGTGGCCAATTCGTGCTCAATGATCCTCAAGGCAGAGAGATATGGAAAGCAGAATTAAGCAGTACTGATGGAGTCGCTTACGGTGCGATGCTCAACACCGGGAACTTTGTGCTTGTAAGTAGTAATTCTAGCTTTATATGGGAGAGCTTTGATATACCTACCGACACCATCTTGCCTTCACAGATATTGGAAGTGGGTGGCAAGCTTTCTTCTCGGCAGAAGGAGGCCAACTACTCGAAGGGAAGATTCCAGCTTCGTCTACTCCCAGACGGAAATCTTGTACTTAATTCAATAGGCTTGCCAACTGAAACTGCTTATGATGCTTATTATATCAGTAACACTTTTGAGGCGGATGCCAACGATTCCGGATATCGGGTTGTCTTCAATGAGTCCGGCTACATTTATATTGTGAGAAGGAACGGAAATATAGTCGACCTTACATCGAGGAACATAGTTCCAATAACAGATTTCTACTATAGAGCGACGCTCGACTTTGATGGAGTTTTCACGCAATACGCTCACCCAAGGAACACTTCTGGTGGCAACAGAAGCTGGTCCATTGTGTGGTTCATTCCGGATGACATTTGTGCTGCAATTCCTGCTGATTTGGGCAGCGGTGCTTGTGGGTTTAATAGCTACTGCACCCTTACATCAGAGAGGAGGCCTAATTGTCATTGCCTACCTGAGTACTCCTTCGTGGATCCAAATAACAGCTTCAGTGATTGCCAACCAAAATTCTCACTAGGATGTCCGGAAGATGAGGATCTATTTGACATGCGGGTGTTGCCGAAGCTGAGATTTCCAAAGGGTAACTACGAAAAGTCTGAATCTTATACTGAAGAGGACTGCAGAAAATCTTGCTTGTATGATTGTTTTTGTGCAGTTGCCACTTTTGCAGGAGATTGTTGGAAGAAGAAGCTACCACTGTCAAATGGCCGGTGGATCCCCAATGAAACTGCAGTGGCTCTCGTAAAAGTAAGAAAAGCTGATTCTCTTCCAGAGAATCCTCATCCTCCAATTTTAAGCAAAAGGAAGAATGATAAAGTGTCGTTGATCCTCTTAGGTAGCTCTGTTGTTTTCAACTTCTTATTGCTAGTTGCAATATCTCTGGTCGTTTTGTTCTGTTGCCACAAGAAACAGAACAAAATTGTACGAGATTCAACTGTTTTAGAAACAAGTCTACAGTCTTTCACGTACAAAGAACTAGTCGAAGCTACTGATGGGTTCAAGGAAGAACTGGGCAGGGGTGCTTTTGGCATTGTTTATAAAGGGATTTTAGCGTTAGGTTCTAGAAACTTTGTGGGCGTCAAGAAGTTAGATAATCTGGTTCAAGAACGTGAGAAGGAATTCAAAACGGAAGTGAGTGTGATTGGCCAGACCCATCATAAGAATCTGGTCCGATTGCTTGGATTCTGTGAGGAGGGGCCTCAGCGGCTTTTGGTATATGAATTCATGAGCAATGGCTCTTTAGCAAGTTTCCTCTTCAGAATTCCAAAGCCTGATTGGAACCAACGAACAGAGATTGCGTTCGGCATCGCAAGAGGGCTCATGTACTTACACGAGGAGTGCAGCACCCAGATCATCCATTGTGATATAAAGCCTCAGAACATCCTTCTTGATGATTGTTTTAAGGCAAAGATTTCCGACTTTGGACTGGCAAAGCTTTTGATGTCTGACCAGTCTCGAACTCGTACAGTCATCAGAGGAACTAAAGGGTATGTCGCACCTGAATGGTTCAGGAACATACCAATTACAGTGAAGGTAGATGTTTATAGTTTTGGTGTCATGTTACTAGAGATCATATGTTGTAGGAAGAGTATGGAGATGGATTTGGAGGACGAAGGGCGAGTAATACTAACAGATTGGGCTTACGATTGCTACAGAGAAAGTAAACTGAATGATTTGGTTGAGAATGATGAGGAGGCAATGAATGACAAGAGAAGACTGGAGAGGTTGGTGATGATAGCAATTTGGTGTATTCAAGAGGAGCCATCGCTAAGGCCTACCATGAAGAAGGTCACACAGATGCTAGAAGGAGTTGTTGAAGTTTCTGATCCCCCATGCCCTTAG 2355 0.4391 MASALCHFLSLLLSLLLPVLAVAQNISLGTSLSAVDDNSSWLSPSGDFAFGFRRQINDDSFLLAIWFDKITDKTIVWYANGDNLAPRGSKVELTSGGQFVLNDPQGREIWKAELSSTDGVAYGAMLNTGNFVLVSSNSSFIWESFDIPTDTILPSQILEVGGKLSSRQKEANYSKGRFQLRLLPDGNLVLNSIGLPTETAYDAYYISNTFEADANDSGYRVVFNESGYIYIVRRNGNIVDLTSRNIVPITDFYYRATLDFDGVFTQYAHPRNTSGGNRSWSIVWFIPDDICAAIPADLGSGACGFNSYCTLTSERRPNCHCLPEYSFVDPNNSFSDCQPKFSLGCPEDEDLFDMRVLPKLRFPKGNYEKSESYTEEDCRKSCLYDCFCAVATFAGDCWKKKLPLSNGRWIPNETAVALVKVRKADSLPENPHPPILSKRKNDKVSLILLGSSVVFNFLLLVAISLVVLFCCHKKQNKIVRDSTVLETSLQSFTYKELVEATDGFKEELGRGAFGIVYKGILALGSRNFVGVKKLDNLVQEREKEFKTEVSVIGQTHHKNLVRLLGFCEEGPQRLLVYEFMSNGSLASFLFRIPKPDWNQRTEIAFGIARGLMYLHEECSTQIIHCDIKPQNILLDDCFKAKISDFGLAKLLMSDQSRTRTVIRGTKGYVAPEWFRNIPITVKVDVYSFGVMLLEIICCRKSMEMDLEDEGRVILTDWAYDCYRESKLNDLVENDEEAMNDKRRLERLVMIAIWCIQEEPSLRPTMKKVTQMLEGVVEVSDPPCP* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00819 784 Gene3D Phosphorylase Kinase; domain 1 466 579 - -
Eupl08g00819 784 Pfam Protein kinase domain 505 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00819 784 CDD STKc_IRAK 508 774 - -
Eupl08g00819 784 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 783 - -
Eupl08g00819 784 SMART serkin_6 502 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00819 784 ProSiteProfiles Protein kinase domain profile. 502 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00819 784 Gene3D - 148 274 IPR036426 -
Eupl08g00819 784 FunFam Serine/threonine-protein kinase 149 294 - -
Eupl08g00819 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 196 IPR036426 -
Eupl08g00819 784 Gene3D Transferase(Phosphotransferase) domain 1 580 781 - -
Eupl08g00819 784 Gene3D - 21 146 IPR036426 -
Eupl08g00819 784 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Eupl08g00819 784 Pfam D-mannose binding lectin 74 160 IPR001480 -
Eupl08g00819 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 21 146 - -
Eupl08g00819 784 FunFam Uncharacterized protein 148 277 - -
Eupl08g00819 784 CDD B_lectin 37 148 IPR001480 -
Eupl08g00819 784 PIRSF SRK 1 784 IPR024171 GO:0004674
Eupl08g00819 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 780 - -
Eupl08g00819 784 FunFam S-receptor-like serine/threonine-protein kinase 472 579 - -
Eupl08g00819 784 Coils Coil 727 747 - -
Eupl08g00819 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Eupl08g00819 784 SMART blect_4 32 148 IPR001480 -
Eupl08g00819 784 SUPERFAMILY Protein kinase-like (PK-like) 484 773 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00819 Eupl-Chr8 23507334 23509721 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00819 481 774 Receptor kinase-like Gene Family AT1G60800 43.854 1.07e-71 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl08g00819 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00819 - - nnu:104603603 994.571