Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00817 ATGGAGATGTACGGACAGACTAACGATGGATCTGATCTTGCTCTTCTCGAATCGATTCGCAGGCATCTTCTCGAGGATTCAGATCCATTGATTAATTTTCCACCAGGAAATTTCGCCGATCCTCCTGTCTATTGCCGTAATAACATCTTTAGTAGTCTTTTCCCTTGCTTAACGGATAACTGGGGAGATTTGCCGTTAAAAGTTGATGATTCAGAGGATATGCTGGTTTACGGCTTTCTCCGTGACGCCGTTAACGTCGGATGGATTCCATCACTAGCCCCCGGGTCACCCGACAGCGGGGCATCGGATATAACAACGGTGTCCGTTAAATCGGAGCCTCAAGATTCGACAACGTCGACGCCGGTGAGGTTGTCAGAGCCTCTGATGGGTTCATCGGCAACGTTCGCTACATCGGTGGCACGGACGGAAAAATCGACTCCGACGGCGGTTCCGGCGAAGGGGAAGCACTACAGGGGTGTACGGCAACGGCCGTGGGGAAAATTCGCGGCGGAGATTAGAGATCCGGCGAAGAACGGCGCGAGAGTTTGGCTCGGAACATTTGAGACGGCTGAGGACGCCGCACTGGCTTACGACCGTGCCGCTTACAGGATGCGCGGCTCGCGCGCTCTACTCAATTTCCCTCTCCGAGTCGGCTCAGCCGACTCGGATCTACCGACACCAGTTACCTCCAAGCGCTCGTCCCCAGAGGCATTGCCGTCATCTTCATCGTCAGATAACGGCTCACCAAAGCGGAGGAAGAGAGTTGCTAGATCAGCAGCATCGGCGGCAGCTCCTCAAGCCGGATTGGACTTGGGAAGCCGATCATAG 828 0.5459 MEMYGQTNDGSDLALLESIRRHLLEDSDPLINFPPGNFADPPVYCRNNIFSSLFPCLTDNWGDLPLKVDDSEDMLVYGFLRDAVNVGWIPSLAPGSPDSGASDITTVSVKSEPQDSTTSTPVRLSEPLMGSSATFATSVARTEKSTPTAVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVGSADSDLPTPVTSKRSSPEALPSSSSSDNGSPKRRKRVARSAASAAAPQAGLDLGSRS* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00817 275 MobiDBLite consensus disorder prediction 95 127 - -
Eupl08g00817 275 MobiDBLite consensus disorder prediction 98 127 - -
Eupl08g00817 275 MobiDBLite consensus disorder prediction 138 157 - -
Eupl08g00817 275 FunFam Ethylene-responsive transcription factor 2 155 215 - -
Eupl08g00817 275 PANTHER DNA-BINDING DOMAIN 120 250 IPR044808 GO:0003700|GO:0009873
Eupl08g00817 275 SUPERFAMILY DNA-binding domain 156 216 IPR016177 GO:0003677
Eupl08g00817 275 ProSiteProfiles AP2/ERF domain profile. 156 214 IPR001471 GO:0003700|GO:0006355
Eupl08g00817 275 Pfam AP2 domain 156 206 IPR001471 GO:0003700|GO:0006355
Eupl08g00817 275 MobiDBLite consensus disorder prediction 223 246 - -
Eupl08g00817 275 CDD AP2 155 214 IPR001471 GO:0003700|GO:0006355
Eupl08g00817 275 MobiDBLite consensus disorder prediction 218 275 - -
Eupl08g00817 275 SMART rav1_2 156 220 IPR001471 GO:0003700|GO:0006355
Eupl08g00817 275 PRINTS Ethylene responsive element binding protein signature 180 196 IPR001471 GO:0003700|GO:0006355
Eupl08g00817 275 PRINTS Ethylene responsive element binding protein signature 157 168 IPR001471 GO:0003700|GO:0006355
Eupl08g00817 275 Gene3D AP2/ERF domain 155 217 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00817 Eupl-Chr8 23427487 23428894 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00817 11 256 AP2-EREBP Transcription Factor Family AT4G17500 53.640 4.54e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl08g00817 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00817 K09286 - ming:122058827 294.278