Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00805 ATGGGAAGGGCTGGCGGAGGACGAGGGGAAGGGATGGCAGGTGGTGGAGTTGAGGTAGGAAGGCCAGGCAGGGATGAAGGCTGGGGTGGAGGGAGAGAAGGTGGAGGAGGGGTTAAGACGGCCAAAGGCTGGAGCCTCCGGCATCTTCCATGCCGGAGAGGGCAGGGAAGGAGGAAGGGTAGGGAAGGGTTTCACAGGAATTTTTTGGGCCCAACTTACTTTTTCATTTTTTTTTCTTCTTTTGAAACCTCAACCTTAAGTCAATGGTGCTTATTAAAGGCTGCTCGTGCCTTGGCTAATTTGGCTGCACATGGAGATAGCAACAGTAACAATGCTGCTGTTGGACAAGAGGCAGGTGCACTTGAAGCATTAGTGCAGCTTACATGTTCTTATCACGAAGGAGTCAGGCAGGAAGCTGCTGGTGCTTTGTGGAATTTATCGTTCGATGACAGAAATCGCGAAGCAATTGCTGCAGCTGGTGGTGTTGAGGCCCTGGTTGCTCTTGCACAAACTTGCTCAAGCGCCTCCCAAGGACTTCAAGAAAGGGCTGCAGGCGCTTTGTGGGGATTGTCAGTATCAGAGGCAAACAGCATTGCTATTGGACGAGAGGGAGGTGTTGCGCCTCTTATTGCGCTGGCACGCTCAAATGCTGAAGATGTCCATGAGACAGCCGCAGGGGCACTTTGGAATCTTGCTTTTAATCCAGGTAATGCTCTGCGTATAGTGGAGGAAGGGGGAGTTCCAGCCCTTGTTGATCTTTGTTCTTCGTCAGTATCAAAGATGGCCCGCTTCATGGCTGCTCTAGCATTAGCTTACATGTTTGATGGGAGAATGGATGAAGTAGCATCGATAGGGCCTTCATCGGAAGGTATTTCAAAGAGTGTAAGCTTAGATGGTGCTAGAAGGATGGCCTTGAAGCATATCGAAGCTTTCGTGCATTCATTTTATGATCTACAATCCTTCTCTGCAGCTGCTGCATCATCAGCCCATGCATCCTTGGCACAAGTAGCAGAAGCAGCACGTATACAGGAAGCAGGACATCTGAGATGCAGTGGAGCTGAGATTGGGAGATTTGTTGCCATGCTTCGGAACTCTTCTTCCGTACTCAAGGCATGTGCTGCTTTTGCTCTTCTCCAGTTCACCATCCCAGGTGGCCGGCATGCAATCCACCATGCAAGACTCTTGCAGAAGGCCGGAGCTGCTCGGGTCCTACGTGCTGCAGCAGCAGCAGCAACAGCACCCATTAAAGCCAAAATCTTTGCGAAGATTGTACTCCGTAATCTCGAGCACCATAATGTAGAGGCTTCAATTTGA 1314 0.5046 MGRAGGGRGEGMAGGGVEVGRPGRDEGWGGGREGGGGVKTAKGWSLRHLPCRRGQGRRKGREGFHRNFLGPTYFFIFFSSFETSTLSQWCLLKAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTCSYHEGVRQEAAGALWNLSFDDRNREAIAAAGGVEALVALAQTCSSASQGLQERAAGALWGLSVSEANSIAIGREGGVAPLIALARSNAEDVHETAAGALWNLAFNPGNALRIVEEGGVPALVDLCSSSVSKMARFMAALALAYMFDGRMDEVASIGPSSEGISKSVSLDGARRMALKHIEAFVHSFYDLQSFSAAAASSAHASLAQVAEAARIQEAGHLRCSGAEIGRFVAMLRNSSSVLKACAAFALLQFTIPGGRHAIHHARLLQKAGAARVLRAAAAAATAPIKAKIFAKIVLRNLEHHNVEASI* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00805 437 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 204 246 IPR000225 GO:0005515
Eupl08g00805 437 PANTHER PROTEIN ARABIDILLO 1 93 434 - -
Eupl08g00805 437 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 119 161 IPR000225 GO:0005515
Eupl08g00805 437 SMART arm_5 149 192 IPR000225 GO:0005515
Eupl08g00805 437 SMART arm_5 108 148 IPR000225 GO:0005515
Eupl08g00805 437 SMART arm_5 193 233 IPR000225 GO:0005515
Eupl08g00805 437 SMART arm_5 234 275 IPR000225 GO:0005515
Eupl08g00805 437 Gene3D - 87 286 IPR011989 -
Eupl08g00805 437 SUPERFAMILY ARM repeat 87 282 IPR016024 -
Eupl08g00805 437 MobiDBLite consensus disorder prediction 1 41 - -
Eupl08g00805 437 Pfam Armadillo/beta-catenin-like repeat 149 191 IPR000225 GO:0005515
Eupl08g00805 437 Pfam Armadillo/beta-catenin-like repeat 195 232 IPR000225 GO:0005515
Eupl08g00805 437 Pfam Armadillo/beta-catenin-like repeat 234 273 IPR000225 GO:0005515
Eupl08g00805 437 Pfam Armadillo/beta-catenin-like repeat 111 147 IPR000225 GO:0005515
Eupl08g00805 437 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 205 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00805 Eupl-Chr8 22952675 22997551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00805 152 432 U-box Gene Family AT2G23140 26.950 5.73e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00805 - - nnu:104610476 560.451