Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00794 ATGCATATTGAGGAATTGAAGGTGGGGGAGTTGGAAAGTGGAGAAGAAGAGTTGGTCACAGATGTTTGCGGTAATGAAAATTTTGCGTCAGATGCAAAAATGGTTTTGATTGGCGTAGGGGCTCGTGTTCTTTTCTATCCAACTCTTGTGTATAATGTTTTCCGGAACAAGATTCAGTCAGAGTTCCGATGGTGGGATTGGGTCGATGAGTTTATATTGTTAGGTGCTGTTCCATTTCCTACTGATGTTCCTCGCTTAAAACAACTTGGTGTTCGTGGAGTGATCACTCTAAATGAGCCATACGAGACATTGGTTTCCACATCACTATATTACGCTCACGGCATTGACCATTTGGTGATCCCTACCAGAGATTACCTTTTTGCTCCGTCATATGGAGATATATGCCAAGCTGTAGACTTCATCCATAAGAATGCATCAAGTGGGAAAACAACATACGTTCACTGTAAAGCTGGTCGGGGACGCAGCACAACCATTGTTCTCTGCTACCTGGTTCAACACAAGCAGATGACACCTGGTGCTGCGTATGAGTATGTGAGGTCAATCAGGCCAAGGGTCCTCTTAGCCTCTATCCAATGGCAGGCTGTTCAAGAGTTTTACCGACGTCAGGTGAAGGAGAATGGAAGGTCCAGCTGTTTGGACAATTTAGTTGTGAAAACCCAAAGTTTCCCTACCACCGGGGACATTGCAGCCTTTGATGACGGCTCAGTTGTGGTGGTAACAGATTTGGACCTAGATGGATACACTGGGAGCTGTAACTCCGGCATTGTGGGCAACGAGATATGGGCAGAGCTGAGCCTGGTGTATAGGGTTCAGTTCGCTGGTCAGGCGGCGCTGGCAAGGCTCTCATGCATGTGGCTGCGCTGTCATGCACGCCAGAAGATGTCAGGGGAGAAGCTGGGCAGGGAGAGCAGCTGCTCCGTGGGGACTGATCAGTTGGGAGGACTTGGTGTAGACATCCACGTGTATTGA 990 0.4818 MHIEELKVGELESGEEELVTDVCGNENFASDAKMVLIGVGARVLFYPTLVYNVFRNKIQSEFRWWDWVDEFILLGAVPFPTDVPRLKQLGVRGVITLNEPYETLVSTSLYYAHGIDHLVIPTRDYLFAPSYGDICQAVDFIHKNASSGKTTYVHCKAGRGRSTTIVLCYLVQHKQMTPGAAYEYVRSIRPRVLLASIQWQAVQEFYRRQVKENGRSSCLDNLVVKTQSFPTTGDIAAFDDGSVVVVTDLDLDGYTGSCNSGIVGNEIWAELSLVYRVQFAGQAALARLSCMWLRCHARQKMSGEKLGRESSCSVGTDQLGGLGVDIHVY* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00794 329 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 132 200 IPR000387 GO:0016311|GO:0016791
Eupl08g00794 329 SMART dsp_5 68 208 IPR020422 GO:0006470|GO:0008138
Eupl08g00794 329 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 296 - -
Eupl08g00794 329 CDD PTPMT1 64 208 IPR044596 GO:0004721
Eupl08g00794 329 Pfam Dual specificity phosphatase, catalytic domain 104 207 IPR000340 GO:0008138|GO:0016311
Eupl08g00794 329 ProSiteProfiles Dual specificity protein phosphatase domain profile. 64 211 IPR020422 GO:0006470|GO:0008138
Eupl08g00794 329 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 57 208 IPR029021 -
Eupl08g00794 329 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Eupl08g00794 329 Gene3D Protein tyrosine phosphatase superfamily 64 213 IPR029021 -
Eupl08g00794 329 FunFam Dual specificity phosphatase domain protein 64 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00794 Eupl-Chr8 22565921 22576896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00794 33 329 Protein tyrosine phosphatase (PTP) family AT2G35680 61.812 3.24e-130 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00794 - - nnu:104610466 505.368