Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00791 ATGATGGTTGAAAAGGAAGATCTTGGGTTGAGTTTGAGCTTGAGCTCTACAGAGAATCGAAACCTGTTGCAGTTGAATCTCATGCCTTCATCGGTTTTATCTTCGTCTCCTTCACCGTTTCCTCTTCAGAAGAGTTCTTGGACTGACGCGTTTGCATCGTCAGAACGTACTTCAGAGATGTACAGAGGCGAGACAAGATCGTTCCTTCGAGGGATCGATGTGAATCGAATGCCATCAATGGTAGACTGCGAAGAAGAAGCAGGGGTTTCTTCTCCGAACAGCACAATATCGAGTGTGAGTGGGAAGAGAAGCGAGAGAGACACCAATGGAGAAGACAACGAAATGGAGAGGGCTTGTTCTCGTGGAATCAGCGATGAAGAAGACGGAGACATGTCAAGGAAGAAACTCAGATTGTCCAAAGATCAGTCTGCCATTCTCGAAGAAAGCTTCAAAGAACACAACACTCTCAACCCTAAACAAAAGCTGGCGTTGGCGAAGCAATTGAATCTCAGACCTCGGCAAGTAGAAGTTTGGTTCCAGAACAGGAGGGCAAGGACGAAGTTGAAGCAAACAGAGGTAGACTGTGAGTTCTTGAAGAGATGCTGTGAGAATCTAACGGATGAGAATAGGAGGTTACAGAAGGAGGTGCAGGAACTGAGAGCACTAAAACTATCCCCACAGTTTTACATGCACATGACCCCACCTACCACTCTCACCATGTGCCCTTCCTGCGAACGTGTGGCAGTCTCATCATCCAACAACTCGGTTGCATCAAACGGTACTGCAACCGCAGCCGTTGATGCTCACCACCACCCAATGGGTACTCATCACCACCGAACCGTACCTATCAACAATCCTTGGGCTGCCAATCCAATCCATCGCGCAACTCGATCGTAA 897 0.4794 MMVEKEDLGLSLSLSSTENRNLLQLNLMPSSVLSSSPSPFPLQKSSWTDAFASSERTSEMYRGETRSFLRGIDVNRMPSMVDCEEEAGVSSPNSTISSVSGKRSERDTNGEDNEMERACSRGISDEEDGDMSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAVSSSNNSVASNGTATAAVDAHHHPMGTHHHRTVPINNPWAANPIHRATRS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00791 298 Pfam HD-ZIP protein N terminus 2 107 IPR006712 GO:0005634
Eupl08g00791 298 Pfam Homeodomain 133 187 IPR001356 GO:0003677
Eupl08g00791 298 MobiDBLite consensus disorder prediction 83 118 - -
Eupl08g00791 298 MobiDBLite consensus disorder prediction 88 103 - -
Eupl08g00791 298 FunFam Homeobox-leucine zipper protein 18 120 194 - -
Eupl08g00791 298 CDD homeodomain 133 190 IPR001356 GO:0003677
Eupl08g00791 298 ProSitePatterns 'Homeobox' domain signature. 164 187 IPR017970 GO:0000981|GO:0006355
Eupl08g00791 298 ProSiteProfiles 'Homeobox' domain profile. 129 189 IPR001356 GO:0003677
Eupl08g00791 298 MobiDBLite consensus disorder prediction 272 298 - -
Eupl08g00791 298 Pfam Homeobox associated leucine zipper 189 223 IPR003106 GO:0006355|GO:0043565
Eupl08g00791 298 Gene3D - 137 187 - -
Eupl08g00791 298 Coils Coil 188 225 - -
Eupl08g00791 298 SUPERFAMILY Homeodomain-like 123 190 IPR009057 -
Eupl08g00791 298 SMART halz 189 232 IPR003106 GO:0006355|GO:0043565
Eupl08g00791 298 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 266 - -
Eupl08g00791 298 SMART HOX_1 131 193 IPR001356 GO:0003677
Eupl08g00791 298 MobiDBLite consensus disorder prediction 104 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00791 Eupl-Chr8 22311733 22313883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00791 1 289 Homeobox Transcription Factor Family AT5G47370 60.596 6.21e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl08g00791 HD-ZIP_N 1.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00791 K09338 - nnu:104598440 450.284