Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00787 ATGCATGTCTTCCTCATCACCTCTTCCTATCTCTGCTACTGCTTCTCCCGCCATTTCAGTTCTCTCTCTAAGCTCCCAAAGCTTCCAAAGCTCCGTAAAATACCCTCCAAGCATCGAGCTCGAGCTATACTTCAAGCACAGCAAGCCCTAACTGACTATCTCTACGCCACTAGATCCTTATCCTTCACCCACGCAGAGTACATTAGCAAGAACTCCTTGTTTTCGCTCTCGGATCTTATCTCCAGAGTCCAATTCTCGCCTTCCAACTTCTCCAGCAACTTCCAGAGGTTCCTCAGATACCATCCCATCAACGAATTCGAATTCTTCTTCGAGAGCATTGGCATCGTTCCTTCGGAGATCAATGGTTTCTTGCCGGCCCACGATTTCTTCTTATCTGAAGAGGGGACTATTTTGAACGCCGCTCGTGCGCTTTCGACATTTGGGTTTCCTTGGAACAAGCTGGGGAAGCTGTACAAGGAGGAAGTTTCCATCTTTGGTCAGAATCCTGAAGCTCTAACTGCTCGGCTTTATGATTTCAAAGAGTTTGGCTTTGATAGTGTTTCAATTGTTGGTATCTGTTTGGCTTTTCCTTTCGTATTGGGCAGAAACGATGAATCAAGCGTTGAGATTGATGCCTTGTTTGCTGTTTTCAGAAGGGTTTTTCTTGATTTTGATTTATTCAGTTCTGTAGAGGGAAATGTAGATGCTTGGTATGAGATTTGTAGGAAAATTAAGGTTTTTTATGATCTCGATTGCGAGAAGGGGAAATTGGGGGAGCTAATAGGTATGAGGCAGCACGTTTTTCTTGAATACCCAGAAGAGGTTTTGGTACAAAAGGTGAAATTTTTTTGTAGATTGAATGCGAGGAAGGATGATGTGGGCTTGTTACTTCTCCAGTTCCCAGAGATTCTAAGTTTTGATTTGGAGCGCCTGGTTTTCCCAGTGTTGGGATTTTTGAAACATATTGGATTGAGTGAATTGGAACTGAATTCTATTGCTCAAAACTACCCTTATGTTTTGGGCAAGAACAGATTGAGGAATTTGCCTCATTTGATGAGAGCCTTGGATCTTCACAATTGGTTCTTCAACAAGATCATGAAAGGGGATCATCACCTGTTAGTCAATTTTGATATTAGTAGTGCCGATGAAGACTTGGAGAAAGATTATAAAGATACCTTGGAGAGAATCCAATCTATGAGGAACCGCAATCACATAATTGGTAAGTTGAATTTCTTACTTGGAATTGGGTTTGGAGAGAATCTTGCTACAATGAAGGCCTTATCATACTTGCATGGCACGACCTGCGAGTTACAAGAGCGATTTGACTGTCTTCTTCACACAGGGATTGAATTCTCCAACCTCTGTAAGATTATAAGTTTGTGGCCGAAGATCCTCAACCAGAACCCAGACATGCTCGAACAGAAGGTGAAATTCCTTTGTAAGGACCTAGGTTGTTCTTTGCAGTACCTAGATGTTTTTCCAGGGTATTTGTGTTTTGATTTAGAAAATAGGATCAAGCCCAGATTTAGAATCCATATGTGGCTTACAGAAAAAGGTTTGATTAGGAGACAATATTCCATTGCAAGCATACTTGCTACATCTGAAAAAAAATTCATAGCTCGTCTTTTCACCATTCATCCGGCTGCCCCAAAACTGTGGTTGGAGTGTTTCTCAGCAACGAACCACAGTAACAGTCAACAAAAGACATAG 1710 0.4187 MHVFLITSSYLCYCFSRHFSSLSKLPKLPKLRKIPSKHRARAILQAQQALTDYLYATRSLSFTHAEYISKNSLFSLSDLISRVQFSPSNFSSNFQRFLRYHPINEFEFFFESIGIVPSEINGFLPAHDFFLSEEGTILNAARALSTFGFPWNKLGKLYKEEVSIFGQNPEALTARLYDFKEFGFDSVSIVGICLAFPFVLGRNDESSVEIDALFAVFRRVFLDFDLFSSVEGNVDAWYEICRKIKVFYDLDCEKGKLGELIGMRQHVFLEYPEEVLVQKVKFFCRLNARKDDVGLLLLQFPEILSFDLERLVFPVLGFLKHIGLSELELNSIAQNYPYVLGKNRLRNLPHLMRALDLHNWFFNKIMKGDHHLLVNFDISSADEDLEKDYKDTLERIQSMRNRNHIIGKLNFLLGIGFGENLATMKALSYLHGTTCELQERFDCLLHTGIEFSNLCKIISLWPKILNQNPDMLEQKVKFLCKDLGCSLQYLDVFPGYLCFDLENRIKPRFRIHMWLTEKGLIRRQYSIASILATSEKKFIARLFTIHPAAPKLWLECFSATNHSNSQQKT* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00787 569 Pfam mTERF 436 538 IPR003690 GO:0003690|GO:0006355
Eupl08g00787 569 Pfam mTERF 241 343 IPR003690 GO:0003690|GO:0006355
Eupl08g00787 569 PANTHER CGI-12 PROTEIN-RELATED 47 544 IPR003690 GO:0003690|GO:0006355
Eupl08g00787 569 SMART mt_12 259 289 IPR003690 GO:0003690|GO:0006355
Eupl08g00787 569 SMART mt_12 155 185 IPR003690 GO:0003690|GO:0006355
Eupl08g00787 569 SMART mt_12 455 486 IPR003690 GO:0003690|GO:0006355
Eupl08g00787 569 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Eupl08g00787 569 SMART mt_12 487 521 IPR003690 GO:0003690|GO:0006355
Eupl08g00787 569 FunFam Transcription termination factor MTEF18, mitochondrial 393 553 - -
Eupl08g00787 569 Coils Coil 382 402 - -
Eupl08g00787 569 Gene3D Transcription termination factor 3, mitochondrial 385 550 IPR038538 -
Eupl08g00787 569 Gene3D Transcription termination factor 3, mitochondrial 231 367 IPR038538 -
Eupl08g00787 569 Gene3D Transcription termination factor 3, mitochondrial 71 223 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00787 Eupl-Chr8 22099660 22102244 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl08g00787 mTERF 6.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00787 - - nnu:104610457 806.208