Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00779 ATGGAAGATCCACTGATTTTAGAGTGTAAAGTTCAAACCTCCTTCCCCTCTTCCTCTTCTACCTCCACCCCCACCACCACCTCCTCCTCTTCAGCAACTTTCTCGGGATTCGACGAAAATCCAAAGATCCCAACGGAGGCCACAACGAAGAAAGGCGATGCAAATGAGACTAGGAAGCAGAATAAGCGCGACAGAGACGGCAAGCACCTAACGTACCGTGGCGTACGAATGCGTCAATGGGGCAAATGGGTGTCAGAAATTCGTGAGCCAAGAAAGAAATCCCGAATTTGGCTTGGGACATACCCCACGCCAGAAATGGCGGCTCGAGCCCATGACGTAGCTGCACTTACGATCAAAGGCCACTCTGCTTATCTTAATTTTCCAGAGCTGGCTTCAGAGCTCCCTCGTCCTGCCAGTGCGTCACCTAAAGACATCCAAGTAGCTGCGGCTAAAGCAGCGGCTGCCTCATTCGGTCAACCAAGATGCCGTGTAGCCGAATCCCAGGCGGCGCAACCCAAGCTGTCAAATCCAACTAGAGCATCCGAGGATACTCTAGAATCCTCAGTTTCTACATCCACAGACGATGATGAAACACTGTTCGACCTGCCCGATCTCCTCGTCGACCCCAGCAATCCAATAAACGAGCTTTGTTACTCTTCGTTATCATGGCTACCAGCCGGAGCTGACATTGGATTCCGACTCGATGAGCTATTCTTATGGGAGTACTATTAG 732 0.5109 MEDPLILECKVQTSFPSSSSTSTPTTTSSSSATFSGFDENPKIPTEATTKKGDANETRKQNKRDRDGKHLTYRGVRMRQWGKWVSEIREPRKKSRIWLGTYPTPEMAARAHDVAALTIKGHSAYLNFPELASELPRPASASPKDIQVAAAKAAAASFGQPRCRVAESQAAQPKLSNPTRASEDTLESSVSTSTDDDETLFDLPDLLVDPSNPINELCYSSLSWLPAGADIGFRLDELFLWEYY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00779 243 SUPERFAMILY DNA-binding domain 71 129 IPR016177 GO:0003677
Eupl08g00779 243 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 51 206 - -
Eupl08g00779 243 MobiDBLite consensus disorder prediction 167 196 - -
Eupl08g00779 243 Gene3D AP2/ERF domain 71 129 IPR036955 GO:0003700|GO:0006355
Eupl08g00779 243 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Eupl08g00779 243 Pfam AP2 domain 72 121 IPR001471 GO:0003700|GO:0006355
Eupl08g00779 243 MobiDBLite consensus disorder prediction 11 38 - -
Eupl08g00779 243 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Eupl08g00779 243 MobiDBLite consensus disorder prediction 44 69 - -
Eupl08g00779 243 MobiDBLite consensus disorder prediction 169 196 - -
Eupl08g00779 243 CDD AP2 72 130 IPR001471 GO:0003700|GO:0006355
Eupl08g00779 243 MobiDBLite consensus disorder prediction 11 69 - -
Eupl08g00779 243 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Eupl08g00779 243 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Eupl08g00779 243 FunFam Ethylene-responsive transcription factor 2 70 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00779 Eupl-Chr8 20389052 20390007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00779 59 239 AP2-EREBP Transcription Factor Family AT2G44940 52.657 1.03e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl08g00779 AP2 7.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00779 - - nnu:104602399 237.269