Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00769 ATGTTTAGGTTGATTGGTCCCTGTGCTTTCATCATGCCATCTCGCCAGCCACCACCACCGCCGTTGATCTTATCGGCGGAAGCGTTACCACTTAAGCCTCTCAACAACGAAACAACCCAACACCACCACCACCCCCACCGCTACTCTCCTCTCATCCCAGTGCTCATCGGCGCAGCCGTAGCCTTATCAATCTTAATATTTCTGGCCGTACTGTACCGGAAATTATCCCGGAAACGGACCGCTCCAGCGGATCTAAAGTCACCTCATCGCTTCTCCTACTCTGTTCTCCGACGCGCCACGTCATCCTTCTCCGCCTCCAACCGCCTCGGCCAAGGTGGATTCGGGTCGGTCTACCGGGGCACCCTCCCATCCGGTCAAGAAATCGCTGTAAAGCTCATGGATTCAGGTTCTTTAGAAGGCGAGCGAGAGTTCCAGAACGAACTCTCCTTGGCTGGGAAGGTGGACTCTGATCACATCGTATCGCTCATCGGTTTCTCCTCTGTTCGGAGGAAGCGTAGCCGTCGGATGCTTCTAGTATATGAGCTCATGCATAATGGTAGCTTGCAGGATGCATTGCTTCATCGCAAGTCTCCAGTGCTGACGGAGTGGAAGAAACGGTTCGCAATTGCAATCGACATTGCGAAAGGACTTGAATTCCTTCATGCTGCTTGCAATCCGCCTATATTTCACGGTGATATCAAGCCAAGTAATGTTCTCTTGGATTCCTATTTCAGTGCCAAGATTGCCGACTTCGGCCTCGCTCGATTGAAGAATGAGGATGCCTGTGAGGCCCAAATTGTGTCAGAAGGGGTTGTTGTTGTTGAGATCGAATCTAATAAAGGAAAGAAGCTAGAAGGATTGGAGATTAATGGAGGAGTTAAAGATAATGGATCTGTAATTGAAGAGACCGAGAGCATTACAACCGGTTTTGAGGAAGCCAGTGTTGGTGTGGATCAGTCACCAGAGAGTTTTTCAAGGGTTCCAGATGCGGAGGCATCATCGGAGAAGATTGTAGCAGAGGCATCTCCGTCTGAGATCTTGGACAAGATGAGCATGTCGGATGGGTGTTTTGATAAGCTTAGCATAGATACTGGGAAGGATTTGGTTGGTGGTGGAAATCAGGGAGGGGGGCGGAAGAAGAGCGATCGGTGGTGGCGTCAGGAAAATGGAGGGGTCTCTGAGTTTGGGGGTGTAAAGGACTATGTGATGGAGTGGATTGGGACTGAGATTAAGGAGGAGAGACCGAAGAGCAATTGGATTGCTGCTTCAGGAGATAGTAGACTGCATGGGAAGTCAAAGCAGAAGAAGCAGAGGAGGAGTTTGGAGTGGTGGACATCATTGGACGAGGAGCAGATCTTGAAGAAGGATAAGCGACGCCCAGCGAGGGAATGGTGGCGAGAGGAGTTCTGTGAGGAGCTTACTAGGAAGAAGAAGTGGGGGCTCAATTCGAGTGGTAGCAGTACTGGAGAAGATCATTGGTGGACGAGGGATGAGACTTTGAGGCAGGACCAGAAAAAGAAGAAGACACGGAGCCAGAGTAGTTGGAGTAGTGTTGATTGGTGGTTGGATGGGCTTACTGGGGAGCTTCGGACTGGTCGGCACAACTGCCGGGACTGGCCAAGTGGAGATATCCCTAAAAGTGGTGGTGTCAATAGCACCCCCAGTTTGAGGGGCACCGTCTGTTACATTGCACCAGAGTATGGTGGTGGCAATCAGCTCTCTGAGAAATGCGATGTTTATAGCTATGGAGTTCTTCTATTAGTTCTGATCTCTGGCCGCCGGCCCCTCCAGGTGACAGCCTCACCCATGTCAGAATTTGAACGGGTGAACCTCATTTCATGGGCCCGTCAACTTGCTCACAGAGGGAAGCTACTGGATCTTGTTGACCCCGCTCTCCAGTCTTTACATCAAGAACAAGCGCTCCTCTGCATCACAATTGCTCTCCTCTGCCTTCAGCAATCCCCTGCCAAGCGACCCACTATTAAAGAAATTGTGAGGATGCTTTCAGGAGAGTCTGAGCCCCCTCACCTGCCCTTCGAATTTTCTCCATCACCACCCTCCAGCTTTCCATACAAGTCCCGGAAGAAGGGCCGGTGA 2097 0.5107 MFRLIGPCAFIMPSRQPPPPPLILSAEALPLKPLNNETTQHHHHPHRYSPLIPVLIGAAVALSILIFLAVLYRKLSRKRTAPADLKSPHRFSYSVLRRATSSFSASNRLGQGGFGSVYRGTLPSGQEIAVKLMDSGSLEGEREFQNELSLAGKVDSDHIVSLIGFSSVRRKRSRRMLLVYELMHNGSLQDALLHRKSPVLTEWKKRFAIAIDIAKGLEFLHAACNPPIFHGDIKPSNVLLDSYFSAKIADFGLARLKNEDACEAQIVSEGVVVVEIESNKGKKLEGLEINGGVKDNGSVIEETESITTGFEEASVGVDQSPESFSRVPDAEASSEKIVAEASPSEILDKMSMSDGCFDKLSIDTGKDLVGGGNQGGGRKKSDRWWRQENGGVSEFGGVKDYVMEWIGTEIKEERPKSNWIAASGDSRLHGKSKQKKQRRSLEWWTSLDEEQILKKDKRRPAREWWREEFCEELTRKKKWGLNSSGSSTGEDHWWTRDETLRQDQKKKKTRSQSSWSSVDWWLDGLTGELRTGRHNCRDWPSGDIPKSGGVNSTPSLRGTVCYIAPEYGGGNQLSEKCDVYSYGVLLLVLISGRRPLQVTASPMSEFERVNLISWARQLAHRGKLLDLVDPALQSLHQEQALLCITIALLCLQQSPAKRPTIKEIVRMLSGESEPPHLPFEFSPSPPSSFPYKSRKKGR* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00769 698 ProSiteProfiles Protein kinase domain profile. 103 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00769 698 PANTHER OS07G0586332 PROTEIN 31 697 IPR044576 -
Eupl08g00769 698 MobiDBLite consensus disorder prediction 672 698 - -
Eupl08g00769 698 Gene3D Transferase(Phosphotransferase) domain 1 537 675 - -
Eupl08g00769 698 Gene3D Transferase(Phosphotransferase) domain 1 183 276 - -
Eupl08g00769 698 Pfam Protein kinase domain 553 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00769 698 Pfam Protein kinase domain 105 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00769 698 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Eupl08g00769 698 SUPERFAMILY Protein kinase-like (PK-like) 85 688 IPR011009 -
Eupl08g00769 698 Gene3D Phosphorylase Kinase; domain 1 74 182 - -
Eupl08g00769 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Eupl08g00769 698 MobiDBLite consensus disorder prediction 317 336 - -
Eupl08g00769 698 SMART serkin_6 103 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00769 Eupl-Chr8 18741118 18743718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00769 546 668 Receptor kinase-like Gene Family AT3G58690 39.200 1.38e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Eupl08g00769 Pkinase 1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00769 - - nnu:104608363 906.746