Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00754 ATGCAAGAACCAGGATTGGGAATGTTGAGTGGTGGTAGTGCTGGAGGAATCGGCGGATATAACGAAAATGTTTCGATGTCGATTTCATTGCCGACTGACCAATTGCGGCTACTGAAGGCGGAGATTGCTACGCACCCTCTTTATGAACAACTACTCGCAACCCACGTCGGCTGTCTTCGTGTTGCTACACCGATCGATCACTTACCGCTTATTGACACCCAGCTCGCACAGTCTCACCATCTTCTTCGATCTTACGCTTCGCAACTTCACCAACCGCAGCAGGTCCTTTCTCCCCACGAGAGACAAGACCTAGACAACTTCTTGGCACAATATCTGTTAGTGTTGTGCTCTTTTAAAGAACAGCTTCAACAACATGTCCGAGTCCATGCCGTTGAAGCTGTCATGGCTTGCCGTGACATCGAACAGTCCTTCCAGGCTCTCACGGGAATAACTCCCAGTGAAGGAACTGGTGCAACAATGTCCGATGATGAGGATGAACTACAGATGGAATGTACTTTGGAAGGAGGCGTAGATGGGCATGACATGATGGGATTTGGTCCACTTCTTCCAACTGAATCTGAGAGGTCACTGATGGAGAGAGTTAGGCAAGAGTTGAAGATTGAACTAAAACAGGGTTTTAGGTCTAAAATCGAAGATGTAAGAGAAGAAATACTTAGAAAGAGAAGGGCAGGTAAATTGCCTGGTGACACAACTTCAGTGTTGAAAAATTGGTGGCAACAACATTCAAAGTGGCCCTATCCAACAGTGTATGAACCTGACTACTACCGGGCTTTCGTAAGTCTTACTACTTATGGGAAGTTTTGTTGA 828 0.4638 MQEPGLGMLSGGSAGGIGGYNENVSMSISLPTDQLRLLKAEIATHPLYEQLLATHVGCLRVATPIDHLPLIDTQLAQSHHLLRSYASQLHQPQQVLSPHERQDLDNFLAQYLLVLCSFKEQLQQHVRVHAVEAVMACRDIEQSFQALTGITPSEGTGATMSDDEDELQMECTLEGGVDGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFRSKIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTVYEPDYYRAFVSLTTYGKFC* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00754 275 Gene3D - 198 268 - -
Eupl08g00754 275 Pfam KNOX2 domain 97 148 IPR005541 GO:0003677|GO:0005634
Eupl08g00754 275 ProSiteProfiles ELK domain profile. 204 224 IPR005539 GO:0003677
Eupl08g00754 275 SMART KNOX1_2 36 80 IPR005540 GO:0003677|GO:0005634
Eupl08g00754 275 SMART KNOX2_2 94 149 IPR005541 GO:0003677|GO:0005634
Eupl08g00754 275 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 84 255 - -
Eupl08g00754 275 Pfam KNOX1 domain 38 79 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00754 Eupl-Chr8 17439452 17460941 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00754 1 255 Homeobox Transcription Factor Family AT1G62990 69.498 6.05e-126 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00754 - - nnu:104596214 413.305