Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00746 ATGGACTCAGTTCAGAAACAAGAAGTCGACGAAGATGATGACAGAGGGACTAGTGATCTGAAAATGAACGGTGGAGTGGGCGAAGAAGCTCTTAATAACAGTAGCAACAGCGACGAAGAGAACAAAAGACGTTCTTCTTCTGACCCTCCAACGGCCACGCCATCACAACAACCAGCATCAACACCAGCACGTCCTGTTTCGACTTCTTCCCAACAAACAGAGGCCGTGCCGCTTGTGTCTATGAAAACAGAGCCGACGGAGACAGAGCAAGAGGTGGAGGAGAGACCACAGCCGATTGGGGTCTTGCCGGTAGCGATGCAGATGCCGATGCCTATGCCGATGTCGATGCAGATTAGAAGATCAGTAGCTCCCGGGAGAAGGGCATCGACGAAAGACCGGCACACGAAGGTCGAAGGCAGGGGAAGAAGAATCAGGATGCCGGCAACCTGTGCGGCCAGGATCTTCCAGCTGACCAGAGAGCTCGGTCACAAGTCCGACGGGGAGACTGTTCGGTGGCTACTCGAACATGCCGAGCCCTCCATTATCGCCGCTACAGGTACAGGCACAGTCCCCGCAATCGCCATGTCAGTCGGGGGAACTCTCAAGATTCCAACGACATCTTCGGCTCCCGAAGGTGAAACGACAAAGAAGAAGCGAAAACGACCAGTAACGAGTGAGTTCTTCGACGCAAACGACGGAGTCTCGATTTCTTCCGGTCTTGCTCCAATCGGAGCGACCGCAGTCGCTGCGGGGCCTCAAGGGCTCGTGCCCATGTGGGCTCTGAGCGGCGGTGGGGGGATTATACCCTCCAATGCGGTTGCTGCTGGAACATTTTGGATGATCCCACCTTCACCCGCCATTGCTGGACCTTCGAACCAGCCGCAACTGTGGACGTTTCCGCCCGCTATGGCTCCTCTAGTCAACATATCTGCGAGACCCATTTCATCATTCATCTCGTCCATGCAGCCAGGTATAAATTTAGCCACCGCTGTCCCAGTTCAAGCTCCTTTTGTATCAAACAACGCAACAGCTTCGGTTGCGTCCTCCGCTAGACCGAAATCTACGAAAGCGTCAGCCATGGCTCCAAGTTCAAGCTCTACTACTACTACTCAGATGCTTAGAGATTTTTCTTTGGAAATTTACGACAAACAAGAGCTTCAGTTCATGGGTCGGTCTGCAAATCATCGCCAACATGACCAGACTACTTCGAAGCCATGA 1218 0.5328 MDSVQKQEVDEDDDRGTSDLKMNGGVGEEALNNSSNSDEENKRRSSSDPPTATPSQQPASTPARPVSTSSQQTEAVPLVSMKTEPTETEQEVEERPQPIGVLPVAMQMPMPMPMSMQIRRSVAPGRRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETVRWLLEHAEPSIIAATGTGTVPAIAMSVGGTLKIPTTSSAPEGETTKKKRKRPVTSEFFDANDGVSISSGLAPIGATAVAAGPQGLVPMWALSGGGGIIPSNAVAAGTFWMIPPSPAIAGPSNQPQLWTFPPAMAPLVNISARPISSFISSMQPGINLATAVPVQAPFVSNNATASVASSARPKSTKASAMAPSSSSTTTTQMLRDFSLEIYDKQELQFMGRSANHRQHDQTTSKP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00746 405 MobiDBLite consensus disorder prediction 1 95 - -
Eupl08g00746 405 Pfam TCP family transcription factor 129 203 IPR017887 -
Eupl08g00746 405 ProSiteProfiles TCP domain profile. 130 184 IPR017887 -
Eupl08g00746 405 MobiDBLite consensus disorder prediction 343 370 - -
Eupl08g00746 405 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 54 375 IPR005333 GO:0003700
Eupl08g00746 405 MobiDBLite consensus disorder prediction 47 85 - -
Eupl08g00746 405 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00746 Eupl-Chr8 16450702 16453302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00746 124 395 TCP Transcription Factor Family AT2G45680 55.272 9.84e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl08g00746 TCP 4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00746 - - nnu:104596206 555.829