Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00708 ATGAGTTTTGGGGGTTTTCTCGATAGTGGTTCTGGTGGTGGTGGTGCAAGAGTAGTGGCGGATTCACCTTACAGCAACATGCCTGTTGGTGCCATCGCTCAGCAACGCCTCGTAGCTCCGTCTCTCGCTAAGTCCATGTTCAACTCTCCAGGCCTCTCTCTCGCACTGCAAACGAGCATGGAGGGGCAAGGCGAGGTAGGTCGGATTGGAGAAAATTTTGAGCCTAGAGTAGGGGGAAGGGCGAAGGAAGACGAATATGAAAGCAGATCTGGAAGTGATAATATGGACGGCGCATCAGGTGATGATCAGGACGCAGAAAATCCACCGAGAAAGAAGAGATACCATCGCCACACTCCCCAGCAAATCCAAGAACTCGAAGCTCTCTTCAAAGAGTGCCCTCATCCTGATGAGAAACAAAGATCGGAACTGAGTAAGAGACTTTGCCTGGAAAGCAGGCAAGTCAAGTTCTGGTTTCAGAATCGACGCACCCAGATGAAGACCCAGCTCGAACGCCATGAGAACTCGATACTTAGGCAAGAGAACGATAAGCTTCGAGCTGAGAACATGTCGATTAGGGATGCAATGAGGAATCCAATCTGCACCAACTGCGGTGGCCCGGCGATGCTCGGCGACGTCTCTTTAGAAGAGCAACATCTTAGGATTGAGAATGCCCGTCTGAAGGATGAACTAGATCGAGTATGTGCCCTTGCAGGCAAGTTCTTGGGCAGGCCAGTGTCTTCCATGGCTAATTCCATCCATCCTCCGATGCCAAACTCAAGTTTGGAACTCGCAGTCGGAAGCAATGGTTTTGGTGGTTTGAGCTCTGTGGCCACAACACTACCACTGGGAAATGATTTTGGAGGCGGGATTTCTAGTAATTTGCCTGTTATGCCTCCACCCAGATCAGCAACTGGTGTGACTGGTCTCGAGAGATCACTTGAGAGATCCATGTTTCTTGAGCTTGCATTGGCTGCAATGGACGAGTTGATTAAGACGGCGCAGACCGACGAGCCCCTTTGGTTCCCAAGTTTGGAAGGAGGGAAAGAAACATTGAACCATGAAGAGTACATGCGGATGTTCCCTCCTTGCATTGGAATGAAACCTAGCGGGTTTGTCACTGAGGCAACAAGGGAGACTGGTATGGTAATCATCAACAGCTTGGCTCTTGTTGAGACACTAATGGATGCGGATCGATGGGCAGAAATGTTTCCTTGTATGATAGCTAGAACCTCAACCACTGATGTTATCTCTAGTGGTATGGGTGGAACCAGAAATGGAGCACTTCAGCTGATGCATGCGGAGCTCCAGGTTCTTTCGCCGCTGGTCGCAATTCGTGAGGTAAACTTCCTCCGATTTTGCAAGCAGCATGCAGAGGGAGTTTGGGCCGTGGTCGATGTGTCGATCGACACCATCCGGGAAAACTCCAATCCACCCACATTTGTGAATTGTAGGAGGCTTCCTTCTGGTTGTCTGGTTCAAGATATGCCCAATGGGTACTCCAAGGTTACCTGGGTAGAACATGCAGAATACGACGAGAGCACAGTTCACCAGCTTTACCGACCGTTACTCAACGCAGGAATGGGGTTTGGGGCTCTAAGGTGGGTAGCTACCCTTAAAAGGCAATGTGAGTGCTTAGCAATCCTCATGTCATCTGCTGTCCCCACCAGGGATCATACCGCGATAACGACAAGTGGACGGCGAAGCATGTTGAAGCTGGCGCAGCGGATGACCGATAATTTCTGTGCTGGTGTGTGTGCATCGACGGTTCACAAATGGAACAAGCTCTGCGCTGGGAACGTAGACGAGGACGTGAGGGTGATGACCCGAAAGAGCGTGGATGACCCTGGTGAGCCACCGGGTGTTGTGTTGAGCGCTGCGACGTCCGTTTGGCTCCCTGTCTCACCGCAGAGGCTCTTTGATTTCCTGCGTGATGAACGGCTGAGAAGCGAGTGGGACATACTGTCTAATGGTGGGCCCGTGCAGGAAATGGCCCACATAGCCAAAGGCCAGGAACACGGCAACTGCGTTTCTCTCCTCCGTGCTACTGCCATGAACGCGAATCAGAGCAGCATGTTGATACTGCAGGAGACATGTATCGACGCAGCAGGGTCGCTTGTTGTGTACGCCCCAGTAGACATACCAGCAATGCACGTCGTGATGAACGGTGGTGATTCAGCTTACGTTGCATTACTCCCCTCGGGATTTGCTATCGTCCCTGATGGTCCTGGTACTCGTGGGACCATGAACAACAGTATGAACAATGGAAGCTCGCCGAGAGTAGGTGGGTCCTTACTGACCGTGGCGTTTCAGATATTGGTGAGCAGTCTCCCAACAGCCAAGCTCACGGTGGAGTCGGTTGAGACGGTCAACAACCTCATCTCATGCACCGTACAGAAGATAAAAGCAGCCCTTCACTGCGAAAGCTAA 2427 0.5155 MSFGGFLDSGSGGGGARVVADSPYSNMPVGAIAQQRLVAPSLAKSMFNSPGLSLALQTSMEGQGEVGRIGENFEPRVGGRAKEDEYESRSGSDNMDGASGDDQDAENPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRSELSKRLCLESRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRDAMRNPICTNCGGPAMLGDVSLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMANSIHPPMPNSSLELAVGSNGFGGLSSVATTLPLGNDFGGGISSNLPVMPPPRSATGVTGLERSLERSMFLELALAAMDELIKTAQTDEPLWFPSLEGGKETLNHEEYMRMFPPCIGMKPSGFVTEATRETGMVIINSLALVETLMDADRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVAIREVNFLRFCKQHAEGVWAVVDVSIDTIRENSNPPTFVNCRRLPSGCLVQDMPNGYSKVTWVEHAEYDESTVHQLYRPLLNAGMGFGALRWVATLKRQCECLAILMSSAVPTRDHTAITTSGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLCAGNVDEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPVQEMAHIAKGQEHGNCVSLLRATAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGTRGTMNNSMNNGSSPRVGGSLLTVAFQILVSSLPTAKLTVESVETVNNLISCTVQKIKAALHCES* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00708 808 Gene3D - 385 544 IPR023393 -
Eupl08g00708 808 SUPERFAMILY Homeodomain-like 95 168 IPR009057 -
Eupl08g00708 808 CDD START_ArGLABRA2_like 315 543 - -
Eupl08g00708 808 FunFam Homeobox-leucine zipper protein HDG1 98 184 - -
Eupl08g00708 808 ProSitePatterns 'Homeobox' domain signature. 143 166 IPR017970 GO:0000981|GO:0006355
Eupl08g00708 808 FunFam Homeobox-leucine zipper protein GLABRA 2 320 543 - -
Eupl08g00708 808 Coils Coil 162 194 - -
Eupl08g00708 808 SUPERFAMILY Bet v1-like 313 544 - -
Eupl08g00708 808 ProSiteProfiles 'Homeobox' domain profile. 108 168 IPR001356 GO:0003677
Eupl08g00708 808 MobiDBLite consensus disorder prediction 75 91 - -
Eupl08g00708 808 Pfam START domain 320 544 IPR002913 GO:0008289
Eupl08g00708 808 CDD homeodomain 110 168 IPR001356 GO:0003677
Eupl08g00708 808 SMART HOX_1 109 172 IPR001356 GO:0003677
Eupl08g00708 808 Pfam Homeodomain 111 166 IPR001356 GO:0003677
Eupl08g00708 808 ProSiteProfiles START domain profile. 311 547 IPR002913 GO:0008289
Eupl08g00708 808 SMART START_1 320 544 IPR002913 GO:0008289
Eupl08g00708 808 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 107 805 IPR042160 -
Eupl08g00708 808 MobiDBLite consensus disorder prediction 63 118 - -
Eupl08g00708 808 Gene3D - 98 184 - -
Eupl08g00708 808 SUPERFAMILY Bet v1-like 565 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00708 Eupl-Chr8 14828359 14834644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00708 1 808 Homeobox Transcription Factor Family AT3G61150 64.380 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl08g00708 START 3.1e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00708 K09338 - nnu:104612725 1407.51