Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00706 ATGGTTCTCAAGACTGAACTCTGCCGCTTTAGTGGTGCAAAGATATACCCTGGTAAGGGTATTAGATTTGTTCGTTCAGATTCACAGGTCTTCCTGTTTGCTAATTCTAAATGCAAGAGGTACTTCCACAACCGCCTGAAGCCATCAAAGCTTACCTGGACGGCTATGTACAGGAAGCAACATAAGAAGGACATTGCTGCAGAGGCTGTGAAGAAGAGGCGTCGTGCTGCGAAGAAACCTTATTCTAGGTCTATTGTGGGTGCTACCTTGGAGGTGATCCAGAAGAGAAGGACTGAGAAGGCAGAAGTCCGAGATGCTGCTCGTGAGGCTGCTCTACGTGAAATTAAGGAGAGGATCAAGAAAACTAAAGATGAAAAGAAGGCTAAGAAAGCAGAGGTGACGGCCAAGTCACAGAAGACTCAGAGCAAGAGTAGCATGCCCAAGGGTGCTGCGCCCAAGGGCCCCAAACTTGGCGGTGGTGGTGGAAAGCGTTGA 495 0.4869 MVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKRRRAAKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREIKERIKKTKDEKKAKKAEVTAKSQKTQSKSSMPKGAAPKGPKLGGGGGKR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00706 164 FunFam 60S ribosomal protein L24 3 64 - -
Eupl08g00706 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Eupl08g00706 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Eupl08g00706 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Eupl08g00706 164 SMART 4TRASH 8 46 IPR011017 -
Eupl08g00706 164 MobiDBLite consensus disorder prediction 117 136 - -
Eupl08g00706 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Eupl08g00706 164 Gene3D - 69 149 - -
Eupl08g00706 164 MobiDBLite consensus disorder prediction 117 164 - -
Eupl08g00706 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Eupl08g00706 164 PANTHER 60S RIBOSOMAL PROTEIN L24 4 154 IPR000988 -
Eupl08g00706 164 Coils Coil 112 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00706 Eupl-Chr8 14729911 14732473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00706 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 82.803 1.30e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00706 K02896 - nnu:104596156 230.335