Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00700 ATGGGGAAAGCAGCTAGGTGGTTTCGTGGACTACTCGGCGGAAAGAAGTCAAGGGACTCTTCTTCGCCGTCGCCGGCAGTGTCAGGTACGTCAGACGCGAAGCCGGGGAAGGAGAAAAATAGGTGGAAGTTCGTCAGATCGTTTAGGGACAGGGAGAGTACTGCGCCACCGGTGAACGGAGATGAGAGGAGGGGATCTTACATGGAGCGATCATCGTTGTCGTCTTCGTATGTTGATGGTGTTGATTCAAACAAGCACGCGATAGCGGTCGCTGCGGCCAGCGCGGCGGTGGCGGAGGCTGCGGTGGCAGCGGCACAGGCGGCTGCGGAGGTGGTGAGGTTGACGAGTAGTGGACGGTGCACCTTGGCTTACGTTAGCGGGAATGGTTTAAGCCTGAGGAAGGAAGATTGGGCGGCTGTTAAGATACAAGCTGCATTTCGAGGCTATTTGGCCAGGAGAGCTTTGCGGGCGCTGAAAGGATTGGTGAAGCTTCAGGCACTAGTGAGAGGGCACATTGTTAGAAAGAAGGCCGCACTTACACTACGATGCATGCAGGCATTGGTTCGAGTCCAGGCCCGAGCACGAGCAGGTCGTGCTCACGTTTCAGAGCCACAACATCCCAAAAAGGCCTCTCCAATTCACCACCCTGGCCCCGCAACCCCCGAGAAATATGAACGCGCAATTCGCTCGTGTAGTCCCAAACATGATCAGCCCTTGATCCTCAAGAGGAATGGATCAAGGCCAAAAAGCATGGATATCATTGATCTAGACAGAACAAACTTGGGTTGGAACTGGTTAGACCATTGGACGGACGAACGTTCAAGGGACTACCGTCGAGAGGCTTCAATGAAAACTGGACCAACAGATGACGAGAAGAACGACAAGATCCTCGAAATGGATTCTGTGAAACCTTACTTAAGCTCGAAACGGAGGAATCTCTTTCAGTCATCCCGGCACACGGCTTCAGATCGGTATAGCCAAAGCTTTACAACATTGAACTCACCGTCATTTGGTGAAGTCCAGTCTAGGAACCCTTCGGGATTTCCCCATGAGGTTGAGGATGCAGCTTTCTGCACAGCCAATAACAGCCCACAGTTCTACTCCGCATCTTCAAGGCCTGGTAGTGCGAAGAAAGGTCCTTTCACACCTACGAAGAGTGACTGTTCTCGAAGCTTCCTCAGCGGGTACTCAGATCATCCAAACTACATGGCAAACACTGAATCATTCATGGCTAAGGTTAGGTCTCAGAGTGCCCCCAAGCATAGGCCTGAGCTTGAGAAATCTAGTTCAAGCAAGAGATATTCCATTCTTGGGTTCGTGGATGCAAGGTCAAGTGCACAGAGGACTTCAGCTTTGCATGCTAACTTCACTAGCAAGGCATATCCAGGCTCCGGCCGGTTGGATAGATTAGGAACGCTGGCTGACAGCATTGCAATCGGGTTTTAA 1446 0.5201 MGKAARWFRGLLGGKKSRDSSSPSPAVSGTSDAKPGKEKNRWKFVRSFRDRESTAPPVNGDERRGSYMERSSLSSSYVDGVDSNKHAIAVAAASAAVAEAAVAAAQAAAEVVRLTSSGRCTLAYVSGNGLSLRKEDWAAVKIQAAFRGYLARRALRALKGLVKLQALVRGHIVRKKAALTLRCMQALVRVQARARAGRAHVSEPQHPKKASPIHHPGPATPEKYERAIRSCSPKHDQPLILKRNGSRPKSMDIIDLDRTNLGWNWLDHWTDERSRDYRREASMKTGPTDDEKNDKILEMDSVKPYLSSKRRNLFQSSRHTASDRYSQSFTTLNSPSFGEVQSRNPSGFPHEVEDAAFCTANNSPQFYSASSRPGSAKKGPFTPTKSDCSRSFLSGYSDHPNYMANTESFMAKVRSQSAPKHRPELEKSSSSKRYSILGFVDARSSAQRTSALHANFTSKAYPGSGRLDRLGTLADSIAIGF* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00700 481 MobiDBLite consensus disorder prediction 197 225 - -
Eupl08g00700 481 MobiDBLite consensus disorder prediction 313 343 - -
Eupl08g00700 481 Pfam IQ calmodulin-binding motif 137 156 IPR000048 GO:0005515
Eupl08g00700 481 Pfam IQ calmodulin-binding motif 162 176 IPR000048 GO:0005515
Eupl08g00700 481 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Eupl08g00700 481 PANTHER IQ-DOMAIN 5-RELATED 1 435 - -
Eupl08g00700 481 Gene3D - 137 177 - -
Eupl08g00700 481 SMART iq_5 134 156 IPR000048 GO:0005515
Eupl08g00700 481 SMART iq_5 157 178 IPR000048 GO:0005515
Eupl08g00700 481 MobiDBLite consensus disorder prediction 34 67 - -
Eupl08g00700 481 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Eupl08g00700 481 MobiDBLite consensus disorder prediction 313 346 - -
Eupl08g00700 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 177 IPR027417 -
Eupl08g00700 481 MobiDBLite consensus disorder prediction 1 67 - -
Eupl08g00700 481 Pfam Protein of unknown function (DUF4005) 364 449 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00700 Eupl-Chr8 14515344 14520360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00700 1 481 IQD Protein Family AT4G23060 42.669 1.02e-73 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00700 - - nnu:104596158 488.804