Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00683 ATGAAACGGGTAGTCTTAAACAGCACTGCAAATTCTGGACCAAGTGTTGGGGCAAGTTCATTGGTCACAGACGCTAACTCGGCACTTTCAGGGGGGCCCCACTTGCAGAGAAATGCCAGCATCAACACAGACTCTTATCTGCGCCCACCTGCATCTCCTATATCATTCTCGTCCAATAATTTAAGTATTTCAGGCTCTTCAGTGATGGATGGTTCCTCTATAGTGCAGCAGAGCTCTCGTCAAGACCAGAGCCCTCAGCAAGTGCAGCAGAGGCAGCAAGGAGCTTCTACTGCTACATCTCAGTCAACATCTCAGACTGGCCAAGATTCGGTTCCTACTGGTCCACAGGTCCCCAGCTCATTAACTCAAGAGCCAAATAATATATTCCAGATGCAGAAGAAACCCAGACTAGACATTAAGCAGGAAGATATTCTGCAGCAACAGCTTCTCCAGAGACAGGATTCCATCCAGTTACAAGGGCACAATACGCAATTACAAGCCTTAATTCAGCAGCAGAGACTCTTGCAGAGGCATCATCATCCACAGCAGATATTGCAGTCTATGCCAGAGTCGCAGCGGGCCCACTTGCAGCAGCAACTGCAGCAACAACAGCTGAGACAACACCTGCAGCAGCAGGGCATGCAGTCAGTATCTGCCATGAAGCACCCCTGTGATAGTGGCGTATGTGCTCGTCGGCTGATGCAGTACATGTATCATCAGCGTCATCGGCCACCTGACAATAGCATTGCCTATTGGAGGAAATTTGTAGCAGAGTATTTTGCTCCTCGTGCTAAGAAAAGGTGGTGTTTGTCGCTATACGATAATGTTGGACATCATGCCCTTGGTGTTTTCCCTCAGGCAGCTATGGATGCATGGCAGTGTGACATTTGCAGTTCTAAATCAGGAAGGGGATTTGAGGCAACTTTTGAAGTACTTCCCAGGCTTAGTAAAATCAAATTTGACAGTGGAGTTATGGACGAGCTTTTGTTTGTCGACATGCCACGTGAACGTAGGTTTCCTTCAGGAATACTGATGTTGGAGTATGCAAAAGCAGTTCAAGAGAGTATTTATGAGCAACTTCGTGTTGTTCGTGAGGGTCAACTTCGTATAATATTCACTCCTGAGTTGAAGATACTGTCATGGGAATTTTGTGCACGTCGTCATGAAGAACTTCTGCCTCGTCGATTAGTAGCACCGCAGGTGAATCAATTGGTGCAGGTAGCACAGAAATATCAAAACTCAGTCACTGAAAGTGGATCTGCAGGAGTTCCATCTCTGGATTTACAAGCAAACTGCAATATGTTTCTCACTGCTGGACGTCAGCTCATAAGGAATTTGGAGTTACAGTCACTCAATGACTTGGGATTTTCCAAAAGATATGTCCGATGTTTGCAGATATCCGAGGTTGTAAATAGTATGAAAGACTTGGTAGATTTCAGCCGGGAGAACAATATTGGACCTATTGATAGCTTGAAGAACTATCCTCGACAGGCTGCAGCGAAGCTTCAAATGCAAAAGATGCAGGAAATGGAGCAGCTGGCCAGTGCTCAGGGTCTGCCAACTGACCAGAACACAATAAATAAACTAATGTCACTGCATCCTGGTCTAAGCAGCTACATGAACAATAACCACCACATTGTTGGAGGCGGAGTTTTGAATAGCTCTGCGCAGACCACTGTGGCATTGAGCAATTACCAAAATTTGCTGCGGCAAAACTCGATGAAAAACCCTAATGCACTTCAACAGGAGGCTTCAAGTTCCTTCAGCAGTTCGAACCTGGCACAGTCTTCTTTACCATTTCAAGGACCTGTGTCTTCAAATTCGGGACCTCTGCAGAATGTACGAGTTAATGGCTTGCAAAGTCCCCATCAGTTACATCAACCACAGCAGCAGCAGCAGCACTTGTTGAATGCTAATAACCTACTCCAACAGAACCATCTACAGGCTTCTCAAGGCAGCCAAAATTTACAACAGCATGTGATCCAACAGCTGTTGCAGGACATGACGAGTAACAGCGGGGGAGGAGGGCCACAACAGAAGCAGCTGCAGCCCCTTGCTGGGCAGAATGCAAATGGGCGTGTGGGTGAGGATGTCTACAATGCAGTCAATGGAACTACAGGTGGTGGATTGCCAGTGAGAGCCGCAGCACAGGTATGGTTGGGAATGGGATAG 2172 0.4692 MKRVVLNSTANSGPSVGASSLVTDANSALSGGPHLQRNASINTDSYLRPPASPISFSSNNLSISGSSVMDGSSIVQQSSRQDQSPQQVQQRQQGASTATSQSTSQTGQDSVPTGPQVPSSLTQEPNNIFQMQKKPRLDIKQEDILQQQLLQRQDSIQLQGHNTQLQALIQQQRLLQRHHHPQQILQSMPESQRAHLQQQLQQQQLRQHLQQQGMQSVSAMKHPCDSGVCARRLMQYMYHQRHRPPDNSIAYWRKFVAEYFAPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICSSKSGRGFEATFEVLPRLSKIKFDSGVMDELLFVDMPRERRFPSGILMLEYAKAVQESIYEQLRVVREGQLRIIFTPELKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKYQNSVTESGSAGVPSLDLQANCNMFLTAGRQLIRNLELQSLNDLGFSKRYVRCLQISEVVNSMKDLVDFSRENNIGPIDSLKNYPRQAAAKLQMQKMQEMEQLASAQGLPTDQNTINKLMSLHPGLSSYMNNNHHIVGGGVLNSSAQTTVALSNYQNLLRQNSMKNPNALQQEASSSFSSSNLAQSSLPFQGPVSSNSGPLQNVRVNGLQSPHQLHQPQQQQQHLLNANNLLQQNHLQASQGSQNLQQHVIQQLLQDMTSNSGGGGPQQKQLQPLAGQNANGRVGEDVYNAVNGTTGGGLPVRAAAQVWLGMG* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00683 723 MobiDBLite consensus disorder prediction 67 125 - -
Eupl08g00683 723 MobiDBLite consensus disorder prediction 668 688 - -
Eupl08g00683 723 PANTHER LIM DOMAIN-BINDING PROTEIN 10 695 IPR029005 -
Eupl08g00683 723 MobiDBLite consensus disorder prediction 668 691 - -
Eupl08g00683 723 Pfam LIM-domain binding protein 232 492 IPR029005 -
Eupl08g00683 723 MobiDBLite consensus disorder prediction 578 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00683 Eupl-Chr8 13989707 14011286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00683 220 499 C2H2 Transcription Factor Family AT1G43850 60.498 7.22e-118 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00683 - - nnu:104596287 904.049