Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00671 ATGGTGGAAGATCGAGGAGAAGAGGTTTTGGTTGATACCCAGTCAGTGGAAGACTGGTTATCACGTGCCCAAGAGCTTGTTCCAATGGTGCACGAGAAAGCAAGGGAGGCTAAGGGGTTTACAGGTCGGTGGAAGATGATAATTTCAAAATTGGAGCAGATCCCATCTCGTTTATCGGATTTATCGAGCCATCCTTTCTTCTCGAAGAATGCCCTCTGTAAGGAGCAATTGCAGGCTGTGTCAATGACGCTAGGTGAGGCAATCAAATTAGCAGAGCTATGTGCAGAAGAGAAATATGGGGGGAAGCTTCAGATGCAGAGTGATCTTGATGCTTTGTCTGCGAAATTGGATCTGAATTTGCGGGATTGTGGGCTTTTGATCAAGACGGGGGTTCTTGGAGAGGCTACCTTGCCTCTGACTGTTGCCCGTTGTTTGGCAGAACCACAGACTGTGAACCATTTGAATATACGCGAATTGCTGGCCCGGCTTCAGATTGGGCATTTGGAGGCAAAGCACCGGGCACTAGACAGTCTCATGGAAATCATGAAGGAGGATGAGAAGAATGTGCTGGCCGTGTTGGGCAGGAGCAATATCTCTGCTCTAATCCAATTGCTCACTACAACCTCTCCGAAGATTCGAGAAAAGACTGTAACCTTGATCTGCTCACTTGCAGAGTCAGGGAGCTGTGAGAATTTGCTTGTTTCTGAAGGTGTACTCCCACCTTTGATTAGGCTGGTTGAATCGGGGAGCACAGTGGGAAAGGAGAGGGCGACAATTTCGCTCCAGAGGTTTTCAATGTCGGTTGAAACAGCCCGTTCGATCGTCGGGCATGGTGGGGTCCCTCCTCTGATTGAGATCTGCCAAACCGGGGAATCAGTTTCGCAGGCAGCAGCAGCAGGTACTTTGAAGAATTTGTCGGCTGTGCCGGAGGTGAGGCAGAATCTTGCTGAAGAAGGGATTGTTAGGGTCATGATCAATCTCCTCGATTGCGGGATATTGTTGGGTGCTAGAGAGTATGCTGCTGAGTGCTTGCAGAATCTCACCTCTAGCAATGACAATCTTAGAAAGTCCGTTATCTCAGAGGGTGGAGTTCGGAGCCTCATGGTTTACCTTGATGGCCCATTACCCCAAGAATCTGCAGTGGGAGCATTGAGGAATCTGGTTGGTTCAGTTTCCATGGAAATTCTAGTTTCACTAGGTCTCCTTCCCTGTTTGGTCCATGTGTTTGAAGCTGGATCCTTGGGTGCAAAGCAAGCTGCCGCATCTGCAATTTGTAGAGTTTGCAGCTCAACAGAGATGAAGAGATTGGTAGGTGAAGCTGGGTGTATTCCTCTGCTTGTCAAGATGCTTGAGGCTAAAACAACTGGTGCAAGAGAGGTTGCTGCCCAAGCACTCTCCAGCTTGGTGACCCTCTCTCATAACTGCAGAGAAGTTAAGAAAGATGAGAAGAGCGTGCCAAATCTAGTCCAACTGCTTGACCCAAGTCCTCAGAACACAGCGAAAAAGTATGCCGTATCCTGCTTAGGATCTCTGTCCTCAAGCAAGAAATGCAAGAAGATGATGATCTCGTATGGAGCCATTGGGTATCTAAAGAAGCTATCAGAGATGGAAATTCCAGGTGCTATGAAACTGCTAGAACGGTTGGAGAGAGGGAAGTTGAGAAGTTTGTTCAGCAGGAAATAA 1683 0.4813 MVEDRGEEVLVDTQSVEDWLSRAQELVPMVHEKAREAKGFTGRWKMIISKLEQIPSRLSDLSSHPFFSKNALCKEQLQAVSMTLGEAIKLAELCAEEKYGGKLQMQSDLDALSAKLDLNLRDCGLLIKTGVLGEATLPLTVARCLAEPQTVNHLNIRELLARLQIGHLEAKHRALDSLMEIMKEDEKNVLAVLGRSNISALIQLLTTTSPKIREKTVTLICSLAESGSCENLLVSEGVLPPLIRLVESGSTVGKERATISLQRFSMSVETARSIVGHGGVPPLIEICQTGESVSQAAAAGTLKNLSAVPEVRQNLAEEGIVRVMINLLDCGILLGAREYAAECLQNLTSSNDNLRKSVISEGGVRSLMVYLDGPLPQESAVGALRNLVGSVSMEILVSLGLLPCLVHVFEAGSLGAKQAAASAICRVCSSTEMKRLVGEAGCIPLLVKMLEAKTTGAREVAAQALSSLVTLSHNCREVKKDEKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSSKKCKKMMISYGAIGYLKKLSEMEIPGAMKLLERLERGKLRSLFSRK* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00671 560 SMART arm_5 350 389 IPR000225 GO:0005515
Eupl08g00671 560 SMART arm_5 394 429 IPR000225 GO:0005515
Eupl08g00671 560 SMART arm_5 308 349 IPR000225 GO:0005515
Eupl08g00671 560 SMART arm_5 185 225 IPR000225 GO:0005515
Eupl08g00671 560 SMART arm_5 430 470 IPR000225 GO:0005515
Eupl08g00671 560 SMART arm_5 472 513 IPR000225 GO:0005515
Eupl08g00671 560 SMART arm_5 267 307 IPR000225 GO:0005515
Eupl08g00671 560 Gene3D - 375 550 IPR011989 -
Eupl08g00671 560 Pfam Armadillo/beta-catenin-like repeat 431 469 IPR000225 GO:0005515
Eupl08g00671 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 558 - -
Eupl08g00671 560 Gene3D - 147 374 IPR011989 -
Eupl08g00671 560 SUPERFAMILY ARM repeat 155 519 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00671 Eupl-Chr8 13716553 13719955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00671 368 530 U-box Gene Family AT3G54790 29.697 7.48e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00671 - - ming:122082481 894.419